Cinclus cinclus (white-throated dipper): 134052536
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Entry
134052536 CDS
T10813
Symbol
SYNRG
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134052536 (SYNRG)
Membrane trafficking [BR:
ccic04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
134052536 (SYNRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
134052536
NCBI-ProteinID:
XP_062363011
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All DBs
Position
22:1311610..1345481
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AA seq
1437 aa
AA seq
DB search
MALRPGPGAGGAGGTGGGTTGAASFMFPVAGGLGPPQAGMIPMQQQGFPMVPVMQANMPG
MMGMNYGSQMPPGPMTMQGGMALGPMPAAGMPYMGQASFLGMRPAAPQYSPDMQKQFAEE
QQKRFEHQQKFLEEERKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRD
AKMHPTPATHPKKPDHPTPSHCAVSVSHSAFLDDEEFSDFMQGPVETPKLVPQSTSQPFH
PATEAGQLLSERAVLQPVPPAQAPVLSTLHGTTGQVPYFPTSASPSNTHKTGSSLEEKAL
ANGSDESEQEQTKLKTSEVGHKASAASQAHPSLTSSDWDVVGGHESGPSAAAEVHKASEQ
NRAVEECGVGVFPPQDPIQQIMPPWIYNDSLVPELYKKILETTLTPAGIDTAKLYPILMS
SGLPRETLGQIWALANRTTPGKLTKEELYSVLAMIAVTQRGIPAVSPDVLNQFPAAPVPT
LSGFPVPLPGGVSQPPLLPAAPPPSVGLGMGASVMGMSIPGPAPAPAPAAPAAAQPSGAF
LPSYPPGQVVKPEDDDFQEFQDASKSGSLDDSFTDFQGEAAKAASSQHRSSVPSLLMPLP
GTKPLSPADKYAVFKGMAAEKPSESAAAFGDGGDKYSAFRELEQPAESKYLGENLAEFKP
AGADDGFTDFKTADSISPLEPPSKDKIFPAPFPPLPAQPKQPTQAKTPLNLADLELFTSP
AETKQPSFPPAFNTSKPGSFPPPPLPSASSQPAPSKTSSLADDFGEFNLFGEFSNGASAS
GQDDFADFMAFNSSSGFSEQKPDDKYNALKLEASPAAQAGSSASTVKGGQSSATTATPTK
YDIFKQLSLEGSGAGFEEAKDSALSSVKSDDDFADFHSNKFSSSGAEKSLVDKVAAFKQA
KEDSASVKSLDLPSIGGSSVGKEDSEDALSVQFDMKLADVGGDLKHVMSDSSLDLPTVSG
QHPPAADVDDLKGGPFGSCHSGSAVSSLASYDWSGSDRDDIQQGKKPSCFSQPSGSGSST
ATSVLQKKETLFGSSENITMTTVSKVTTFSSEDALQDVSFAAFANFKDSGPVSSALSDDD
VGDFGDFARLPPEAQDAAAADTALGDDFLHGDSSELRREATDDFGEFQSEKAKISKFDFL
VATSQGKVKSSEEMIKSELATFDLSVQGSHKRSLSLGDREISRSSPLPALEQPFRDRSNT
LSEKPALPVIRDKYKDLTGEVEESERYAYEWQRCLESALQVIKKANDTLNGISSSSVCTE
VIQSAQGMEYLQGVVEVYRVTKRVELGIKATAVCSEKLQQLLKDIDKVWNNLISFMSLAA
LTVRPKKTAWLLKQMSSFDLKRLCRPDENSLDFSSCMLRPGIKNAQDLACGVCLLNVDSR
SKKEEKPLEELPKKAFNSETDNFKLAYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggcccgggcccggcgcggggggcgccggcggaacgggcggcggaacgacc
ggggccgccagtttcatgtttcctgtcgcaggaggtttgggcccccctcaagctgggatg
attcctatgcaacagcaaggatttccaatggttcctgtcatgcaagccaatatgccagga
atgatgggaatgaattatggctctcagatgcctcctggacccatgaccatgcagggtggc
atggccctggggccgatgccagcagctggaatgccatacatgggacaggcctcgttcctg
ggaatgcgcccggccgccccccagtacagcccggacatgcagaagcagtttgcagaggag
cagcagaagaggtttgagcaccagcagaagttcttagaggaggaaagaaaacggcgtcag
tttgaagagcagaaacaaaagctgagactcctgagcagtgtgaaacccaagacaggagaa
aaaagcagagatgatgctttggaagccattaaaggaaacttagatggcttttctagagat
gctaaaatgcacccaacaccagcaacacacccaaaaaagccagatcatcccacaccatcc
cattgtgctgtatctgtttcccattctgcttttctcgatgatgaagaatttagtgacttt
atgcaagggcctgttgaaacccccaaactggtgcctcaatccacctctcagcctttccat
cctgccactgaggctgggcagctgctttcagagagggctgtgctccaacctgtccctcca
gcccaggctccagtgttatccaccctgcatggtacaactgggcaggttccttattttcct
acctctgcatctccatccaatacccataaaacaggctcttccttggaggagaaagcttta
gctaatggctcagatgaatctgaacaagagcaaaccaaacttaaaacttccgaagttggg
cacaaagcttcggctgcaagccaagcccatcccagtctcaccagcagtgactgggatgtt
gtaggtggacatgaaagtggtcccagtgctgctgcagaggtgcacaaggcttcagaacaa
aacagagcagttgaagagtgtggagttggagtgttccctccccaggaccccatccagcaa
attatgcctccctggatttacaatgacagcttggtcccagagctgtataagaaaatctta
gaaaccactttgactcctgctggaattgacacagccaagctctaccccatcctgatgtcc
tcgggactgcccagagagaccctggggcagatctgggccttggccaaccgcaccacgccc
gggaagctcaccaaggaggagctctactctgtgctggccatgatagcagtgactcagaga
gggatccctgccgtgagccctgacgtgctgaaccagttcccagccgcgcccgtccccacc
ctgtccgggttcccggtgcctctgcccggaggggtgagccagcccccgctgctgcccgcg
gctcccccgccctccgtggggctgggcatgggagcatccgtgatgggcatgagcatcccc
ggccctgctcctgcccctgctccagctgctccagctgcagcacaaccttctggagccttc
ctgccttcctacccacctggccaggtagtaaaaccagaagatgatgacttccaggagttt
caggatgcctccaagtctggctccctggatgactccttcactgatttccagggggaggca
gccaaagcagccagttcacagcaccggagcagtgttccttctttactaatgccactccca
ggtactaagccactgtcaccagctgataaatatgctgtgtttaaaggaatggcagctgag
aagccttctgagagtgcagctgcttttggagatggtggggacaagtacagtgctttccgg
gaattagagcaaccagcagaaagcaaatacttgggagagaaccttgcagagttcaaaccc
gcaggagccgacgatggtttcacagatttcaaaaccgctgacagcatctccccgttagag
ccaccctcaaaagacaaaatcttccctgcacccttccctcctctgcctgctcagccaaaa
cagccaacacaagccaagacccctttgaatctggcagacttggagctctttacctctcct
gcagaaaccaagcagccatccttcccacctgcgtttaacacctcgaaacctggctccttt
ccccccccaccccttccatctgcctcttcccagccagcacccagcaaaacttcaagctta
gctgatgactttggagagttcaacctttttggggaattttctaacggcgcatcagccagt
ggacaagatgactttgcagattttatggctttcaacagcagcagcgggttttccgaacaa
aaacctgatgacaaatacaatgcactcaagctggaggccagccctgctgctcaggctggc
tcctcagctagcacagtgaagggtgggcagagctctgccaccactgctactcccaccaaa
tatgacattttcaagcagctgtccctggaaggctcgggagcgggcttcgaggaggccaag
gacagcgcgctctcctcggtgaagagcgatgatgactttgctgacttccactccaacaag
ttttcttccagcggcgccgagaagtcgctggtggacaaagtggcagctttcaagcaggcc
aaagaagactctgcttcagtgaaatccctggatctgccctccatcggtggcagcagcgtg
ggcaaggaggactccgaagacgctctgtctgttcagtttgacatgaaactggctgatgtg
ggaggagatcttaagcatgtcatgtctgatagctctttggatttgccaacagttagtggc
cagcatccaccagcagcagatgtggatgacttaaagggtggcccgtttggaagctgtcac
agtggctctgcagtcagcagcctggcgagctacgactggtctggctccgacagggacgac
atccagcagggcaagaaaccctcctgcttctcccagccctcggggagtggctcctccacg
gccacctctgtcctccagaagaaggagaccttgtttggcagctcagaaaacatcaccatg
acaacagtttccaaagtgacgactttctccagcgaggatgctttgcaggatgtttccttt
gcagcctttgcaaactttaaggactccgggccggtgtccagcgctttgagcgacgacgac
gtcggggattttggggattttgccagacttcccccagaagctcaggatgcagcagcagct
gacacagccctgggtgatgatttcctccatggagactcctctgagctgcggagagaggcc
acggatgacttcggggagttccaaagtgaaaaagcgaaaatcagcaagtttgacttcttg
gtggcaacttcccaaggcaaggtgaaatccagtgaggagatgatcaagagtgagctggcc
acctttgacctgtctgtgcaagggtctcataagaggagcctgagcctgggggacagagaa
atcagtcgctcctcacctctgccagctctggagcagcccttcagggaccgctcgaacacc
ctgagtgagaagccagccctgcccgtgatcagggacaagtacaaggacctgactggggag
gtggaggagagcgagaggtacgcctacgagtggcagaggtgcctggagagtgccctgcag
gtcataaagaaagcaaatgacaccttaaatggaatcagcagttcatctgtttgcactgaa
gttatccagtctgctcaaggcatggaatatttacagggggttgttgaagtctacagagta
acaaagagggtggagctgggcatcaaagcaacggcagtttgcagtgagaagctgcagcag
ctgctgaaggatattgataaagtgtggaacaacctgatcagcttcatgtccctggctgct
ctgacggtaagacccaaaaaaactgcctggttactaaaacaaatgtcatcgtttgattta
aagaggctttgcaggccagatgaaaactccctggatttctcttcttgtatgctgcgccca
gggattaaaaatgcccaggaccttgcctgtggagtgtgtctcctaaatgtggattccaga
agcaaaaaagaagagaaacctctggaagaacttcccaagaaagcctttaactctgagaca
gataacttcaagctggcatatggggggcaccagtaccacgccagctgtgccaacttctgg
atcaactgcgtggagcccaaacctccagggctcatcctgccagacctgctctga
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