Cinclus cinclus (white-throated dipper): 134052544
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Entry
134052544 CDS
T10813
Symbol
RFC2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03030
DNA replication
ccic03410
Base excision repair
ccic03420
Nucleotide excision repair
ccic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134052544 (RFC2)
03410 Base excision repair
134052544 (RFC2)
03420 Nucleotide excision repair
134052544 (RFC2)
03430 Mismatch repair
134052544 (RFC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccic03032
]
134052544 (RFC2)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134052544 (RFC2)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134052544 (RFC2)
DNA replication proteins [BR:
ccic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
134052544 (RFC2)
DNA Replication Termination Factors
ELG1-RFC complex
134052544 (RFC2)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
134052544 (RFC2)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
134052544 (RFC2)
Check point factors
HRAD17(Rad24)-RFC complex
134052544 (RFC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_lid_RFC1
nSTAND_NTPase5
AAA_14
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
Rad17
AAA_11
RuvB_N
AAA_assoc_2
nSTAND3
AAA_19
DNAX_ATPase_lid
AAA_24
MipZ
AAA_18
AAA_5
AAA_28
ABC_tran
AAA_25
AAA_23
AAA_30
NTPase_1
SLFN-g3_helicase
MeaB
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
134052544
NCBI-ProteinID:
XP_062363039
LinkDB
All DBs
Position
22
Genome browser
AA seq
356 aa
AA seq
DB search
MEVDVAEDEKAGPSAGEKRGPVDPAGAAPGGGSGHYELPWVEKYRPMKLSEIVGNEDTVS
RLEVFAKEGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAVLELNASNDRGIDVVRN
KIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKII
EPIQSRCAVLRYTKLTDAQILARLLKIVEKEDVAYTDDGLEAIIFTAQGDMRQALNNLQS
TYSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWRLGYSPEDVIGN
IFRVCKTFQMPEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTAAPAAS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatgtggcggaggacgagaaggccgggccgtcggcaggcgagaagcgggga
cccgtcgaccccgcgggggccgcgcccggcggtggcagcggccactacgagctgccctgg
gtggaaaaatacagacccatgaaactgtccgaaatagttggaaatgaagatactgtgagc
aggttggaggtctttgcaaaagaggggaatgtaccaaatattataattgctggccctcca
ggaacaggtaaaaccaccagtatcctgtgtttggctcgtgctctgcttggtcctgcatta
aaggatgctgttctggagctgaatgcctccaatgacagaggcattgatgttgtaagaaac
aaaatcaaaatgtttgcccagcaaaaggtcactcttccaaaaggtcggcataaaataatc
atccttgatgaagcagacagcatgacagatggagcacagcaagcactgagaagaacaatg
gaaatttattccaaaacaacacgcttcgcactggcgtgcaatgcctctgacaaaatcata
gaacctattcagtctcggtgtgcagtgctgcgttacaccaagctgacagatgcacaaata
cttgccaggctactgaaaattgttgagaaagaggatgtagcatatacagatgatggacta
gaggccattatcttcacagcccaaggtgatatgagacaggcattaaacaacttacagtcc
acatactctggatttggctttataaacagtgaaaatgtctttaaggtatgtgacgaacct
catcctctgcttgtgaaggaaatgatacaacactgtgtaaatgcaaatattgatgaagca
tacaagattcttgcccacctgtggcgccttggatactctccagaagatgtcattggcaat
atcttccgtgtgtgtaagacctttcaaatgccagaatatctaaaactggaatttatcaag
gaaattgggtacactcacatgaagattgcagaaggtgtgaactcccttttacaaatggct
gggctgctggcccgcctgtgccagaagactgcagcccctgcagccagttag
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