Cinclus cinclus (white-throated dipper): 134052686
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Entry
134052686 CDS
T10813
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04142
Lysosome
ccic04144
Endocytosis
ccic05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134052686 (CLTC)
04142 Lysosome
134052686 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
134052686 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134052686 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccic04147
]
134052686 (CLTC)
Membrane trafficking [BR:
ccic04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
134052686 (CLTC)
Exosome [BR:
ccic04147
]
Exosomal proteins
Proteins found in most exosomes
134052686 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
134052686
NCBI-ProteinID:
XP_062363249
LinkDB
All DBs
Position
22:complement(2705143..2735228)
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPSQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQLCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAVTFFT
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
NKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatctgggcatc
aacccagcaaacattggcttcagcactctgacaatggagtctgacaaattcatctgcatc
agagagaaagtaggagagcaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaatccgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattaaaagctgggaaaacactgcaaatctttaacattgaaatgaagagcaagatgaag
gctcacaccatgacagatgatgtcaccttctggaagtggatctctctgaacactgttgcc
ctcgtgacggataatgccgtttaccactggagcatggagggggagtcccagcctgtgaag
atgtttgatcgccactccagccttgctggctgccagatcatcaactacagaactgatgcc
aagcagaaatggctcttgctgactggaatatctgcacagcaaaaccgtgtagtgggagca
atgcagttgtactctgtggacagaaaagtgtcccagcccatcgagggacatgcagccagc
tttgcacagttcaagatggaagggaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaat
caaccctttccaaagaaagctgtggatgtcttctttcctcctgaagcacaaagtgacttt
cctgttgctatgcagatcagtgacaagcacgatgtggtgttcctcataacaaagtatggc
tacatccacttgtatgacctggaaactggcacctgtatctacatgaacaggatcagtgga
gagaccatttttgttactgcacagcacgaagcaacagctggaattattggagtcaacaga
aagggacaagtgctctcagtgtgtgtggaagaggagaacatcattccctacatcacaaat
gtgctgcagaatcctgacctggctttacggatggctgtccgcaacaacctggcgggggcc
gaggagctctttgccaggaaattcaatgcactctttgcacaagggaactattcagaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttccatcccagccagggcagacttcccctctcctgcagtattttggcatt
ctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctc
cagcagggccgcaagcagctcttggaaaaatggttaaaagaagataagctggagtgctcg
gaggagctgggagaccttgtaaaatctgtagatcctacgctagcacttagtgtctatctg
agagccaatgttccaaacaaggtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggttggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgctcgttcaagatgaa
gagcctcttgcagatataacacagattgtggatgtctttatggaatataatttaatccag
caatgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtcccctg
cagacacgtttacttgagatgaacctcatgcacgcgcctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaggct
ggtttgctgcagagagcgctcgagcacttcacagacctgtacgacatcaagcgtgcggtg
gttcacactcacctcctcaatcctgagtggttagtgaattattttgggtccttgtcagta
gaagactctctggagtgtctgcgtgcgatgttgtccgctaacatccgtcagaacctgcag
atctgtgtccaggtagcttccaaataccatgaacagctgtccacacagtcactcattgag
ctctttgagtccttcaagagctttgaaggtttgttttattttctgggctccattgtaaac
ttcagccaggatccagatgtgcacttcaagtacattcaagctgcctgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggaagctaaactcactgatcagctgcctctcatcatcgtgtgcgaccgc
tttgactttgtccacgacttggtgctgtatttgtatagaaataatctccaaaaatatatt
gagatttatgtacagaaggtgaatccaagccgtctgcctgttgttattgggggactgctt
gatgtggattgctctgaagacgtgataaagaacctcatccttgtagtgagaggtcaattt
tcaactgatgaacttgttgcagaggttgagaaaagaaacaggctgaagctgcttctgccc
tggctggaagcaagaattcacgagggctgtgaggagcctgccactcacaatgcactggcc
aagatatacattgacagcaacaacaacccagagagattcctgcgtgagaacccctactat
gacagtcgtgttgttggcaagtactgtgagaagagggatcctcacctggcctgtgtggct
tacgagcgtggacagtgtgatctggagctgattaatgtgtgcaatgagaactccctcttc
aagagtctctcccgctacttagttcgtcgtaaggaccccgagctctgggccagtgtgcta
ctggaaagcaacccctacagaagacccctgattgaccaggttgtccagactgcgctgtca
gagacccaggaccccgaggaagtctctgtcactgtgaaggccttcatgactgcagatctt
cccaatgagctcattgaactgctggagaaaatagttctggataattcagtgttcagtgag
cacaggaatctgcagaaccttctgatccttacagctatcaaggctgaccgcacccgtgtc
atggagtacatcaaccgcctggataactatgatgcccctgatatagccaatattgccatc
agcaatgagctttttgaggaggcatttgctatcttcaggaagtttgatgtcaacacatca
gctgtacaggtgttgatagagcacattgggaacctggaccgtgcgtacgagtttgccgag
cgctgcaatgaacctgcagtgtggagccagctggccaaagcacagctccagaaggggatg
gtaaaggaagcaattgactcctacattaaggcagatgatccttcctcatacatggaagtt
gttcaagctgctaatgccagtggaaactgggaagaactggtgaagtatctgcagatggca
cgcaagaaggctcgggagtcgtatgtggaaacagaattaatctttgctcttgctaaaaca
aaccgcctggcagagctagaggagttcatcaatggccccaacaatgcacatatccagcag
gttggtgatcgctgctatgatgagaagatgtatgaagcagccaagctcttgtacaacaac
gtgtccaacttcggccgtttggcctcgaccttggtgcacctcggcgagtaccaggcagcc
gtggatggtgctcggaaagccaacagcactcgcacgtggaaggaggtctgctttgcttgt
gtggatggtaaagaattccgcctggctcagctgtgtgggcttcatattgtagtgcatgca
gatgagctggaagagctaatcaactattaccaggatcgtggctactttgaagagctgatc
actatgttggaagcagctcttggactggagcgagcacacatggggatgttcacagagctg
gcaattctctactccaagttcaagccacagaagatgagggagcacttggagctgttctgg
tccagagtcaacattcccaaggttctgagagctgcagaacaagcccatctctgggctgag
ctggtattcctgtatgataagtatgaagaatatgataatgccataatcacaatgatgaat
cacccaacagatgcttggaaagaaggccagttcaaagatatcatcactaaggtggccaat
gtggagctgtactacaaggcagttcagttctatttggaatttaagcccctgctgctcaat
gatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtcaccttcttcaca
aaggttaaacagctgcccctggtgaagccttacctgcgttctgttcaaaatcacaacaac
aaatcagtcaatgagtctctcaacaacctcttcattattgaagaagattaccaggctctt
aggacttctatagatgcttatgacaactttgacaacatttctcttgcccaacgtttggag
aaacacgagctaatagagttccgaagaatcgctgcctatctcttcaaaggcaacaaccgc
tggaaacagagtgtggagctctgcaagaaggacaggctgtacaaggatgccatgcagtac
gcttccgaatccaaagatactgagctggcggaagagctgctgcagtggttcttgcaggag
aacaagagggaatgctttggtgcttgtctcttcacctgctacgatctcctaaggccagat
gttgtcttggaaacagcgtggaggcacaacattatggactttgccatgccctactttatt
caggtcatgaaggaatacttgaccaaggtggataaactggatgcatcagagtctttgaga
aaggaagaggagcaagctacagaaacacaacctattgtttatggccagccccagctgatg
ctgacagcaggacccagcgtggcagttcctccacaggcaccttttggctacggctacacg
gcccctccgtacgggcagccccagcccggctttggctacagcatgtga
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integrated database retrieval system
