Cinclus cinclus (white-throated dipper): 134052753
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Entry
134052753 CDS
T10813
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134052753 (CHD5)
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GFIT
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NCBI-GeneID:
134052753
NCBI-ProteinID:
XP_062363367
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Position
23:5240547..5263486
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AA seq
1952 aa
AA seq
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MRGPAAARELLDDADNEEDVSEEDDGVLEGLDEFFSEDQAVVQKKKKSKKLKDGKTAKIK
RRKKEGSNDEMSENEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEEEDDNE
DGGLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTITPALPASPQHSALPPIIRKAKT
KEGKGPGVRKKIKSSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSMRSECSAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPPAPL
PPVLPTADPELPLPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDNQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDK
KGDIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGK
KLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMVSQGQRIAMQDAVTPFSDTLSAKGGAATAGMKKKHGGTPPGDNKDVDDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVLEGPESKRSGEVVSSDPNTPVPASPAHTH
TGPGALADKIEAQLRFHEEKDLVEQKPRRVSDSQVPASAEVEREEHPESCGSKERPREEK
QEDCEKAEPSSELLVKDEGIQEREKPLEKAELSSSPGKGEDKEVKPEDGKEEEKEPSDAQ
QNGDKEEEEEGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDVWHRRHD
YWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALV
IEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVL
NQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQGSFGSAQI
FNNSFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggcggccgcccgggagctgctggacgacgcggacaacgaggaggatgtg
tcggaagaagatgatggggtgctggaaggattggatgagtttttttcagaagatcaagct
gtggtacagaaaaagaagaaatccaagaagctgaaagatggcaagactgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagaaaatgaagaggagattgaagag
aagtcagaaagtgaagggagtgactattctcccaacaaaaagaagaagaaaaaactgaaa
gacaagaaggagaagaaggcaaaacggaagaagaaggatgaagaagaggatgacaatgag
gatggaggtttaaaggagcccaagagctcagcccagctcatggaggaatggggtcttgat
gatgtagattacgttttctcggaagaggattatcacactctgacaaattacaaagctttc
agccaattcctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatg
atgacagtgctcggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcggctgcagcagctgtggctgcagctgtggagactgtcaccatcaccccg
gccctccctgccagcccccagcactctgccctgccccccatcatcaggaaggcaaaaacc
aaggaggggaagggtccaggtgtacggaaaaaaatcaagagctccaaagatgggaagaaa
aagggaaaagggaaaaagatggcaggcttgaaattccggtttggaggaatccccagcaaa
aggaaaaagggctcctctagtgaagaggaggaacgggaagaatctgactttgacagtgcc
agcatcaacagctcctccatgcgctctgagtgctcagctggcctggggaagagagggaag
aagaggaaaaagaaaaagaggatcgaagagggggacgggtatgagacggaccatcaggac
tactgtgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgcccccgtgcc
taccacctggtctgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccgaaggaggaggaggaagaagaagag
gatggtggcgaggaggaggaggatgaccacatggagttctgccgtgtctgtaaggatgga
ggggagctgctgtgctgtgacacctgcccgtcctcctaccaccttcactgcctgaacccg
ccgctgccagagataccaaacggtgaatggctctgcccacgctgtacatgccctccgttg
aagggcaaagtccagcgcatcctgcactgggcctggaaggagccgccgcctgccccgctc
ccacctgtgctgcccaccgcagacccagagctgcctctccccccaccgaaggtgctggag
ggcatcccagagcgtgaattctttgtgaaatgggcaggcctctcctactggcactgctcc
tgggtcaaggagctgcagctggagctctaccacaccgtgatgtaccgcaactaccaacgg
aagaacgacatggatgagccaccagccttcgactacggctctggggacgaggacaaccag
agggagaagcggaagaacaaggacccccagtatgccaagatggaggagcggttctaccgc
tatggcatcaagcccgagtggatgatgatccaccgcatcctgaaccacagctttgataag
aagggagacatccattacctgatcaagtggaaggacctgccctatgaccagtgcacctgg
gagatcgatgatatagacatcccctactatgagaacctcaaactcctctactggaaccac
agggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaa
aagctgaaagaggagaagctggaaaagcctccagaaacacctcttgtggatcctacagtg
aagtttgacaagcagccatggtacattgatgccacgggaggcacgctgcacccttaccag
ctggaagggctgaactggctgagattctcctgggcacaagggacagatacaatcctggct
gatgagatggggctagggaagacggtgcagactattgtgttcttgtattccctgtacaaa
gagggccactcgaaagggccgtacctagtcagtgcccccctctccaccatcatcaactgg
gagcgtgagtttgagatgtgggcacctgacttctacgtcgtgacctacacgggggacaag
gagagccgctcggtcatccgggaaaatgagttttcttttgaagacaacgctatccggagc
gggaagaaggtcttccggatgaagaaggaagcccagatcaagttccacgtcttgctcacg
tcctatgagctgatcaccattgaccaggcggtgctgggctccatagagtgggcctgtctg
gtggtggatgaagcacacaggctgaaaaacaaccagtccaaattctttagagtactgaat
agctacaagatcgattacaagctgcttctcacagggactccgctccagaacaacttggaa
gagctcttccacctgctcaatttcctgactccagagaggtttaacaacctggaggggttc
ctggaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctg
ggtccccacatgctgcggcggcttaaggccgatgtgttcaagaacatgccggccaaaacc
gagctgatcgtgcgagtggagctgagccagatgcagaagaagtactacaaattcatcctg
acaaggaacttcgaagctctgaattcgaaaggtggtgggaaccaggtctcattgctcaac
atcatgatggacctgaagaagtgctgcaatcacccctacctgttccctgtggcagccgtg
gaggccccagtgctgcccaatggatcttatgatgggaattctttggtcaaatcttctggg
aaactgatgctgcttcaaaagatgctgaagaagttacgggatgggggtcacagagttctg
atcttctcacagatgacaaagatgctggatttgctggaggatttcctggagtacgaaggc
tacaagtatgagcggatcgacgggggcatcactggtggcctgcgccaggaggccatcgac
aggttcaatgctcctggggctcagcagttctgcttcctcctctccacccgtgctggtggt
ctgggcataaaccttgctacggccgacactgtcattatttatgattctgactggaatccc
cacaatgacatccaggcattcagcagagctcaccgcatcgggcagaacaagaaggtgatg
atttaccgcttcgtgaccagagcctctgtggaggagcgcatcacccaggtggccaaaagg
aagatgatgctcacccacctggtggtccgcccggggcttggctccaagtcgggatccatg
accaagcaagagctggatgacatcctcaagtttgggacagaagaactcttcaaggatgat
gtggagggcatggtgtctcagggacagcggattgccatgcaggatgctgttacccctttc
tcagacacactgtcagcaaaagggggtgcagcaactgctggcatgaaaaaaaagcatggt
ggcaccccaccaggtgacaataaggatgtagatgacagcagtgtgatccactatgatgat
gctgccatctctaagcttttggaccgaaaccaggatgcaactgatgacacggagctgcag
aacatgaatgagtatctcagctcctttaaagtggctcagtatgttgtgagagaagaggac
ggtgtggaggaagtggaacgggagatcatcaagcaagaggagaatgtggaccctgactat
tgggagaagctgctgcggcaccactacgagcagcagcaggaagatctggccaggaacctg
gggaaagggaagagaatccgcaagcaggtcaactacaatgacacctctcaggaggaccaa
gagtggcaggatgagctttctgacaaccagtcagagtattccattggctctgaggatgag
gatgaagactttgaagagaggccagaaggccagagtggcagaagacaatcccggagacag
ctgaagactgacagagacaaacctctccctcctttgctggcaagagttggggggagcatt
gaggtcctgggcttcaacgcccggcagcgcaaggcattcctgaatgccatcatgcgctgg
ggaatgccaccccaggatgccttcaactcccactggctggtccgggatctgcgagggaag
agcgagaaggagttcagggcgtatgtctctctcttcatgagacacttgtgtgagcctggg
gcagacggtgctgagacctttgcggacggtgttcctcgggaagggctgtcacgccagcac
gtgctgactcgcatcggggtcatgtcactagtaaggaagaaggtccaggaattcgagcat
gtcaatgggaagtacagcaccccagacctggttcttgagggtccagagagcaagagatcc
ggtgaagttgtgtcttcagatcccaacacgcctgttccggccagtccagcacacacacac
acaggaccaggagcccttgcagacaaaatagaagcacagttgaggttccatgaggaaaag
gacttggtggagcagaagcccagaagggtgtctgacagccaggtgcctgcaagtgctgaa
gtggagagagaagagcacccagaaagctgtggcagtaaggagaggccaagggaagagaag
caagaggattgtgaaaaggctgagccttcttctgagctcctggtgaaagatgaagggatt
caagagcgagagaagcctttggagaaggcggagctgagcagcagcccagggaagggggag
gataaagaagtcaaaccagaggatggcaaggaggaagagaaggagccaagtgatgcccag
caaaacggtgacaaagaggaagaggaggaaggaaagaaggatgacagaaatatgaacttc
agattcatgttcaacattgctgatggtggcttcacagagctgcacacgctgtggcagaat
gaggagagggctgccatgtcctctggcaagatctatgacgtctggcaccgccgacatgac
tactggctgttggcaggaattgtcactcatggctatgcccgctggcaggacatccagaat
gacccacgctatgtgatcctgaacgagcccttcaagtcagagatacacaaggggaactac
ctcgagatgaagaacaagttccttgcccgacggtttaagttgctggagcaggccctggtg
atcgaggagcagctgcggagggcggcgtacctcaacatgacccaagaccccagtcacccg
gccatggcactgaatgcgcggctggcagaagtggagtgccttgccgagagccaccagcac
ctctccaaagagtccctggctggaaacaagcctgccaacgctgtcctgcacaaggtgctg
aaccagctggaggagctgctgagtgacatgaaggctgatgtgacacgcttgccctccatg
ctgtcccgcatcccgcccgtggctgcccggctgcagatgtcagagcggagcatcctcagc
cgcctggccacccgtggaggagacccagctgcccagggctcctttggctccgctcaaatc
ttcaacaatagctttgggccaaatttccgtggtcctgggccaggaggaattgtcaactac
agccagatgcctctgggaccctacgtgactgatatttag
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