Cinclus cinclus (white-throated dipper): 134052818
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Entry
134052818 CDS
T10813
Symbol
UBE4B
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04120
Ubiquitin mediated proteolysis
ccic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134052818 (UBE4B)
04120 Ubiquitin mediated proteolysis
134052818 (UBE4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134052818 (UBE4B)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134052818 (UBE4B)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
U-box type E3
134052818 (UBE4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
134052818
NCBI-ProteinID:
XP_062363480
LinkDB
All DBs
Position
23:8407442..8441213
Genome browser
AA seq
1346 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGSSSQPSTPLTSPQRETPPGPPGAAPAPGPSHSLGLNVHSM
TPATSPIGASGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDSVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLTDKEPLSGSEVSEEQALQLVCKIFRVSWKDRDRDVIFL
NSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQARDENPFASLTATSQPIAAAARSPD
RSLILNMGSNPGSSPMFCNVGSFGSSSLSSLYGTSPAPPTNFTSYVPMTGSSLTPPASSV
ATPAVAPMSVSSQLPAGSPWWTQPSSPRYHPYTVAHSGGSAAAIPRSLGIAIPSSSPSPP
AVAAGPPAMPAITSRLRPTAMGPPLFPASPGALRRRPSFQSRIPPSLYDNPFSLLLLAVS
DVSEDSSDEENEDDDFSCVQFGSSVGGSGSSSVSDSCSDHFTIENCKETEMLNYLIECFD
RVGIEERKAPKMCSQPTVSQLLSNIRSQCISHAALVLQGSLTQPRSLQQQSLLVPYMLCR
NLPSGFIPELVRTTYQDEEVFKQIFIPILQGLAVASKESSLDSDNFKYPLMALCELCEIK
FGKTHPMCSLVVSLPLWLPKSLSTGAGRELQRLSYLGAFFSLSVFAEDDNKVVEKYFSGP
AITLENTRVVSQSLQHYLELARQELFKILHSVLLNGDTREAALSYMAAVVNANMKKAQMQ
TDDRLVSTDGFMLNFLWVLQQLSTKIKLETVDPMYIFHPRCRIELPTDETRVKATMEEVA
AWTAELYRDPSPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRTVEDLKN
NETQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDENFLRRCLNFYGTVIQLML
RILDPAYPNIKLPLTPEVPKVFASLPEFYVEDVAEFLFFIVQYAPQVLYEPCTQDIVMFL
VVMLCNQNYIRNPYLVAKLVEVMFMTNPAVQPRTQKFFEMIENHPLSTKLLVPSLMKFYT
DVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINMLINDTT
FLLDESLESLKRIHEVQEEMKNKEQWDLLPREQQQARQSQLAQDERVSRSYLALATETVD
MFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQL
TDIYLQLDCPRFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAEKVEENV
AKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSSTDPFNRQTL
TENMLEPVPELKEQIQAWMRDKQNDH
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgcggacgagatccgtcggaggcgcctggcacggctggcaggaggc
tcctcgtcccagcccagcacccccctgacgtccccgcagagagagacccctccggggccg
ccgggcgcagcccccgcgccgggaccctcgcacagcctgggcctcaatgtgcacagcatg
accccagctacctctcccatcggggcatcaggagtagcccaccgaagccagagcagcgaa
ggagtgagttccctcagcagttctccatcaaacagccttgaaacccaatctcagtccctc
tctcggtcccagagcatggacattgatagtgtctcctgtgagaaaagcatgtcccaggta
gatgtggattcaggaattgagaacatggaggttgatgagaacgaccgcagagagaagcgg
agtctgacggacaaggagcctctgtcgggatcagaagtgtcagaggaacaagctctacag
ctggtctgtaagatcttcagggtctcttggaaggaccgagacagagatgttattttcctg
aattcactctctgcccagttcaagcagaacccaaaggaagtgttttcagattttaaggac
ttgattgggcagattttgatggaagtactgatgatgtccacccaggcaagggatgagaat
ccctttgccagcctgacagccacctcccagcccattgctgcagctgcccgctctcctgac
agaagcctcatcctgaacatgggctccaaccctggaagcagccccatgttctgtaatgtg
ggctcctttggttccagctcgttatccagtctctatgggactagtccagctcctcctacc
aatttcacaagctatgtaccaatgactggttcatctcttaccccaccagccagttcagtt
gccaccccagcagtggctcccatgtctgtcagctctcagttgccagcaggcagcccctgg
tggacacagccctcctctcctcggtaccacccctacaccgtggcccattccggaggctct
gctgctgccatccctcgttccttgggcattgccatcccatctagttctccaagtcctcct
gccgtggctgctggccctccagccatgccagccatcacatccagactcaggcccacagcc
atgggtccacctttgtttcctgcttcacccggtgccttgcgcaggcgtccctcctttcag
agcaggattcctcctagtttatacgacaaccctttctccctcctccttcttgctgtttct
gatgtgtctgaggacagtagtgatgaagaaaatgaagatgatgatttttcttgtgtccag
tttgggtccagtgtggggggctctggcagctcgagtgtttccgattcctgcagtgaccac
ttcaccattgaaaactgtaaggagacagagatgctgaactacctcattgagtgttttgac
agggttggaatagaggagagaaaagcaccaaagatgtgtagccagccaacagttagccag
ttactgagcaacatcagatcccagtgcatttcacacgctgctttggtgctacagggatcc
ttaacacaaccaaggtcattgcagcagcagtctttgctggtaccatatatgctgtgtagg
aatctcccatctggcttcattcctgaattagtgagaacaacttaccaggatgaagaggtg
ttcaaacagatctttattcccatcttacaaggcctggctgtggcttccaaagagagctcc
ctcgatagtgacaattttaaatatccccttatggcactatgtgaactttgtgaaatcaag
tttgggaagacacaccccatgtgcagtttggttgtctctttgcccttgtggttgcctaaa
tctttaagcactggtgcaggaagagaactgcaaagactttcctaccttggagccttcttc
agtctgtctgtctttgctgaagatgataacaaagtagttgagaagtacttctcagggcct
gccattactcttgagaacacccgggttgtcagccagtctttgcaacattacctggaatta
gcaaggcaagagctgttcaagatcctgcacagtgtcctgctgaacggggacacccgggag
gcagctctcagctacatggcagctgtggtcaatgccaacatgaagaaggcccaaatgcag
acagatgatcgtttggtgtccacagatggcttcatgctcaacttcctctgggtgctacag
caactgagtacgaagataaagctggaaacggttgatcccatgtacatattccaccccagg
tgtcgaatcgagcttcccacagatgagacaagagtgaaagcaacaatggaggaggttgca
gcctggactgctgaactttacagggatccgtctccgttttctgagcccaagttccccacg
gaatgcttcttcctgacgctgcacgcccatcacctgtccatcctgcccagctgccgccgc
tacatccgcaggctgcgcgccatcagggagctcaacaggactgttgaagatttgaaaaac
aatgaaactcagtggaaggattctcctctggccaccaggcatcgagagatgctgaaacgg
tgcaagacacagcttaagaaactggtgaggtgcaaggcttgtgcagatgctggtttactg
gatgaaaacttcctcaggagatgcctgaatttctatggcacggtgattcagctgatgctt
cgcattcttgaccctgcctatcccaacataaaattgcctttaactcctgaggttccgaaa
gtatttgcatcattgccagagttttatgtggaagatgttgctgaatttttattttttatt
gtacaatatgctcctcaggtgctgtatgagccctgtactcaggacatagtgatgttcctt
gttgtgatgctgtgcaaccagaactacatccgaaatccttacttagtagccaagctggtg
gaagtgatgttcatgacaaatccagctgttcagccccggacacagaagttctttgaaatg
attgagaatcaccctctctccactaaattgttagtcccctccttgatgaagttttacaca
gatgtggagcataccggagccactagcgagttctatgacaagtttacaatccgctaccac
atcagcaccattttcaaaagcctctggcagaatatagctcaccatggtacatttatggaa
gagttcaactctgggaagcagtttgttcgctacatcaacatgctgataaatgacacaact
ttcttgctggatgagagtctggagtccctaaaacgtatccatgaagtgcaagaggagatg
aagaataaagagcaatgggacctgctgcccagggagcagcagcaggcccggcagtcgcag
ctggcccaggatgagcgcgtgtcccgttcctatctcgccctggcaacagaaactgttgat
atgttccatatccttaccaagcaggtccaaaagccttttctcagacctgaacttggacca
cgactggctgctatgttgaactttaacttacagcagctgtgtggccccaagtgccgtgac
ctgaaagttgaaaacccagagaagtacgggtttgaaccaaagaagctgttggaccaactg
actgacatttatctgcagctggattgtcctcgctttgctaaagcaattgctgatgatcag
aggtcctacagtaaagagctctttgaggaggtgatctccaagatgaggaaggctggaatc
aagtcaaccatagcaatagagaaattcaaactgctggcagagaaagtggaggaaaatgtt
gccaagaatgcccgtgcagagattgattacagcgatgctccggatgaattcagagaccca
ctgatggacactctgatgaccgaccccgtgaggctgccctcaggaaccatcatggacagg
tccatcatcctgaggcacctgctgaactcctccacggatcccttcaaccgccagactctg
acagaaaacatgctggagccagtgccagaacttaaagagcaaatccaagcctggatgaga
gacaagcagaatgaccattga
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