Cinclus cinclus (white-throated dipper): 134052836
Help
Entry
134052836 CDS
T10813
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134052836 (USP48)
Peptidases and inhibitors [BR:
ccic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134052836 (USP48)
Ubiquitin system [BR:
ccic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134052836 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134052836
NCBI-ProteinID:
XP_062363514
LinkDB
All DBs
Position
23:1500263..1530460
Genome browser
AA seq
1031 aa
AA seq
DB search
MAPRLQLEKAAWRWTETVPPEAVAQEHIEAAYRVRLEPCQRGACRRNCRGNPNCLVGIGE
HVWLGEIDENSFHNIDDPNCERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLC
PSTCGDGVPKDTDYEPQTICEHLQYLFALLQNSKRRYIDPSGFVKALGLDTGQQQDAQEF
SKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQG
HKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQT
GHKKKLNTYIGFSELLDMEPFMEQKNGVYVYELSAVLIHRGVSAYSGHYIAHVKDPQTGE
WYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRLQAREK
SLTVQVPAFLQELVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPAEAGSP
YDFISLEWLQKWLDESTPPKPIDNTACLCSHGKLHPDKISLMKRISEYVADFFYRRYGGG
PRLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKMTIKGNDGFWVGKASLRSWRQL
ALEQLNEQDEDAEHSNGKMNGNAQNKDESNEEKREEEEELNFNEDIVCPHGDLCISENER
RVVSKEAWEKLKQYFPKAPEFPNNKECCSQCKILEREGEENEALHKMMASEQKTSLQNLF
HDKCRPCLGSWPQETDELYVVSQFFVEEWRKFVRRPTRCSPVSSIANSVLLCPHGGLMFT
FASMTKEDSKHIALIWPSEWERIQKLFVVDHVIKITRTQAGGAGPESVHYTSEPELCPEC
REGLLCQQQRDLREYTQATIYIHKVVDNKKVMKDAAPELNVSSSEAEEEREENKPEGEQD
PDFNQANGGTKRQKLSQQSYITYQKQGIRRSTRHRKVRGEKALLVSANQTLKELKIQIMH
AFSVAPFDQNLSLDGRILSDDTATLGSLGVIPESVILLKADEPIADYAAMDDVMQVCMPE
EGFKGTGLLGH
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcggctgcagctggagaaggcggcgtggcgctggaccgagacggtgccgccc
gaggcggtggcgcaggagcacattgaggcggcctatcgcgtccggctggagccttgccag
cgcggcgcctgccggagaaactgccgggggaaccccaactgcctggtgggcatcggggag
cacgtgtggctgggcgagatcgacgagaacagcttccacaacattgatgaccccaactgt
gagcgccgcaagaagaatgcgtttgtgggcctgacaaaccttggtgccacgtgctacgtc
aacaccttcctgcagatgtggttcctgaacctggagctgcggcaggcactctacctgtgc
cccagcacctgcggggatggtgttcccaaggacacagactatgagccccagaccatctgt
gagcacctgcagtacctgtttgctctgctgcagaacagcaagcggcgctacatcgaccct
tcaggctttgtcaaagcattggggctcgacaccgggcagcagcaggatgcccaggagttt
tccaagctgttcatgtccctgctggaagatactttgtccaaacagaaaaacccagatgtc
cggaacattgtgcaaaagcagttttgtggagagtatgcctatgtcacagtctgcaaccag
tgtggcagagaatctaaactggtgtctaaattttacgagctggagttaaacatccaagga
cacaagcagttgacagactgtataacagaattcctcaaggaagaaaaattagaaggggac
aatcgctatttttgtgagacttgtcagagcaagcaaaatgccacaaggaagatccggctg
ctcagcctgccttgcaccctcaacctgcagctcatgcgctttgtgtttgacagacaaact
ggccacaagaagaagctgaacacctacatcggcttctcagagctgctggacatggagcct
ttcatggagcaaaaaaacggtgtgtacgtttacgagctgagcgctgtgctcatacaccgt
ggagtaagtgcctactccgggcactacattgcccatgtgaaggacccgcagacaggcgag
tggtacaagttcaacgatgaggacatcgagaagatggaggggaagaaactgcagctgggg
attgaggaagatctagcggagccatcaaaatcccagacccgtaagcccaagtgtgggaag
ggcacacactgctcccgcaatgcctacatgctggtatacaggctgcaagcccgtgagaaa
tccctcacagtccaagtgccagcttttctgcaggagctggtagagcgggataactgcaag
tttgaggagtggtgcaacgaaatggctgagatgcgcaaacagagcgtggccagaggcaag
atcaaacacgaggaggtgaaggagctctaccaaaggttacccgctgaagctggttccccc
tatgacttcatctctctggaatggctgcagaagtggctggatgagtccactcctcccaaa
cctattgataacacagcctgcctgtgctcccatggcaaactccatcctgataaaatatcc
ctgatgaagaggatatcagaatatgtggccgacttcttctaccggcgatatggaggaggg
ccccggctcaatgtcaaagcactttgcaaggactgtgtggtggaaaggtgccgaatcctg
cggctgaagaaccagctgaacgaggactacaaaactgtgaccaacctgctgaagatgaca
atcaaggggaacgacgggttttgggttggaaaggcatccttgagaagctggcgtcagctg
gctctggagcagttaaatgagcaagatgaagatgcagagcacagtaatggaaaaatgaat
ggaaatgcgcaaaacaaagatgaatcaaatgaagagaagagggaggaggaagaggagtta
aattttaatgaagacatcgtttgcccacatggtgacttgtgcatctctgaaaatgagcgg
agagtggtttccaaggaagcctgggagaaactaaagcaatattttccaaaagcccccgaa
ttcccaaataataaagagtgctgttcccagtgcaagattttggagcgtgaaggggaggaa
aatgaagctctgcataaaatgatggccagtgagcagaagacttctctccagaacctgttc
catgataaatgcagaccttgcctgggcagctggcctcaggagacagatgagctgtatgtt
gtttcgcagttctttgtagaagaatggaggaaatttgtcaggaggccgacgcgctgcagc
cccgtgtcctccatagcaaacagtgtcctgctctgtccccacggggggcttatgttcacc
tttgcttccatgaccaaagaagactccaaacatatagctctgatatggcccagcgagtgg
gagaggatccaaaagctctttgtcgtggatcatgtcatcaaaatcacccggacacaggca
ggtggggccggccctgagagcgtccactacacctctgagcccgaactgtgccctgaatgc
cgggaagggctcctgtgccagcagcagcgggacctgcgcgaatacacccaggccaccatc
tacatccacaaagtggtggataataaaaaggtaatgaaggacgcggctccagagctcaat
gtgagcagctcggaagctgaagaggaaagggaggaaaacaagccagagggggagcaagat
cccgattttaaccaggccaatggcggcacaaaacgccagaagctctcccagcagagctac
atcacttaccaaaagcagggaatcaggagaagcacacggcaccggaaagtccggggggag
aaagcgctgctggtgtcagccaaccagaccctgaaagagttgaaaatccagatcatgcac
gccttctctgtggccccctttgaccagaacctgtccctggatgggaggatcctgagtgat
gacacagccacgctgggcagccttggagttatccctgagtccgtgatcctgctcaaggcc
gatgagcccattgcagattacgctgccatggacgatgttatgcaagtttgtatgcctgaa
gaggggtttaaagggactggtttactcggccactga
DBGET
integrated database retrieval system
