Cinclus cinclus (white-throated dipper): 134052876
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Entry
134052876 CDS
T10813
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccic03016
]
134052876 (TRDMT1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
134052876 (TRDMT1)
Transfer RNA biogenesis [BR:
ccic03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
134052876 (TRDMT1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
134052876
NCBI-ProteinID:
XP_062363583
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Position
1:20026107..20054708
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AA seq
410 aa
AA seq
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MAALRVLELYSGIGGMHQALRESCTYAEVVAAVDVNTLANDVYKYNFPSTPLWAKTIEGI
TLKEFDRLSFDMILMSPPCQPFTRIGLQGDVSDPRTKSFLYILSILPRLQKLPKYLLLEN
VKGFESSSARNELLQTLTTCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLHQEPFPFQAPG
QILTSFPDQDPEDLLKEEVAGKVGENSSSLSSEEKNLGPNIGPDCSSKKSLPKEAFLFKL
ETVEEMERKHNQDNDSSIQMLKDFLEEENEEMSQYFLPPKSLLRYAFLLDIVEPTCRRST
CFTKGYGHYVEGTGSVLQTAVDVQLESVFKCIDELPEEEKLMKLSTLKLRYFTPREIANL
HGFPSEFGMCCKITTSTLFVRNANVFFFFFTGTNPIFLFCIFFRLLGSYD
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctgcgggtgctggagctgtacagcggcatcgggggcatgcaccaggccctc
agagaaagctgcacatatgcagaagttgtagctgctgttgatgtgaacactcttgccaat
gatgtttataagtacaactttcccagtacgccgctatgggcaaagactattgagggcata
acactgaaagaatttgacaggttatcttttgatatgattttgatgagtcctccctgtcag
ccgtttacaagaattggcctgcaaggtgatgtgtctgatccacggacaaagagctttctc
tatattcttagtattcttccaaggcttcagaagcttccaaaatacctacttttagaaaat
gttaaaggatttgaatcctcttctgcaagaaatgaacttttgcaaacactaacaacatgt
ggatttaaatatcaggaatttctcttgtctccaacctgtcttggcattcccaattctaga
ctgcggtattttctaattgcaaagcttcaccaagaaccatttccctttcaagctcctggt
caaatattgacaagcttcccagatcaggatccagaagatttactcaaggaagaagttgct
ggcaaagtgggtgaaaacagttcttctttgtcctctgaagagaagaatctgggtccaaac
attggtccagattgcagcagcaagaaaagtttaccaaaagaggcctttctatttaagctt
gaaacagtagaagaaatggaaaggaaacataatcaggataatgattcctctattcaaatg
ctaaaagacttcttggaagaagaaaatgaagaaatgagtcagtatttcttaccaccaaag
tccttactgcgctatgctttcttgttagacattgttgaacccacctgccggagatccacg
tgctttacaaaagggtatggacactatgtagaagggaccggctcagttctgcagacagca
gtagatgtacagcttgaatcagtatttaaatgcattgatgagttaccagaagaggagaag
cttatgaaattgtcaacactaaaactgaggtactttaccccaagagaaatagcaaatctt
catggattcccttcagaatttggtatgtgctgcaaaataaccacttctacattattcgtc
agaaatgccaatgtatttttttttttttttactgggactaatccaatctttttattttgc
atttttttcagattgcttggttcttatgattga
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