Cinclus cinclus (white-throated dipper): 134052928
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Entry
134052928 CDS
T10813
Symbol
HES4
Name
(RefSeq) transcription factor HES-4 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03460
Fanconi anemia pathway
ccic04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
134052928 (HES4)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134052928 (HES4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134052928 (HES4)
03400 DNA repair and recombination proteins [BR:
ccic03400
]
134052928 (HES4)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
134052928 (HES4)
DNA repair and recombination proteins [BR:
ccic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
134052928 (HES4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Motif
Other DBs
NCBI-GeneID:
134052928
NCBI-ProteinID:
XP_062363663
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All DBs
Position
23:7612484..7614014
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AA seq
325 aa
AA seq
DB search
MPADTGMEKPTASPIAGAPASASHTPDKPRSASEHRKVNGGGGGGCRSGRSNGGGGAGWR
QARGRAESSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLR
NLQRAQMTAALSADPTVLGKYRAGFNECMNEVTRFLSTCEGVNTDVRTRLLSHLSACLGQ
IVAMNYPPPPPPPPPPSQPAHLAQQPLHVQMPPGTAGAVPVPCKLNPSEALSPKVYGGFQ
LVPATDGQFAFLIPNPAFPPSSGPVIPLYANANVPVSAGGGSGNAAATPSVSPVQGLTSF
GGSIGSASQAGSPVGERSESVWRPW
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacacgggcatggagaaaccgaccgcctctcccatcgccggcgcgcccgcc
agcgctagccacacaccggacaagccgcggagcgccagcgagcaccggaaggtaaatgga
ggaggaggaggagggtgccggtcggggcgcagcaacggtggcggcggagctggatggcga
caagcccgcggccgtgctgagtcgtccaagcccatcatggagaagcggcgccgggcgcgg
atcaatgagagcctggggcagctcaagacgctcatcctggacgcgctcaagaaggacagc
tcgcggcactccaagctggagaaggcggacatcctggagatgaccgtgaagcacctgcgg
aacctgcagcgggcgcagatgaccgccgctctcagcgccgaccccaccgtcctcggcaaa
taccgggccggtttcaacgagtgcatgaacgaggtgacccggttcctgtccacctgcgaa
ggggtcaacaccgacgtgcgcacgcggctcctgagccacctctcggcttgcctgggccag
atcgtggccatgaactaccccccgccaccgccgccgccaccgccgccctcccagcccgca
catctggcgcagcagccgctgcacgtccagatgcccccgggcacagctggagccgttccc
gtgccctgcaagctcaacccttccgaagctctgtccccaaaagtttatggcggtttccag
ctcgtcccggctaccgatggtcagttcgcctttctcatcccgaacccagccttccctccc
agctccggaccggttattcctctctatgccaacgccaacgtgccggtgtcggcgggagga
ggctccgggaacgcggccgccaccccctcggtatcgccggtgcaaggtttgacatcattt
gggggcagcattggttcagcatcccaagccgggagtcccgttggagagcgcagtgaatcc
gtctggagaccctggtga
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