Cinclus cinclus (white-throated dipper): 134052995
Help
Entry
134052995 CDS
T10813
Symbol
YBX1
Name
(RefSeq) Y-box-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134052995 (YBX1)
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134052995 (YBX1)
03041 Spliceosome [BR:
ccic03041
]
134052995 (YBX1)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
134052995 (YBX1)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
134052995 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
134052995 (YBX1)
Spliceosome [BR:
ccic03041
]
Common components
Common spliceosomal components
General mRNP proteins
134052995 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
DUF8529
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
134052995
NCBI-ProteinID:
XP_062363754
LinkDB
All DBs
Position
23:complement(3666280..3675683)
Genome browser
AA seq
324 aa
AA seq
DB search
MSSEAETQPPAAPVPAAAPAAPADSKPNGGTGNGGSGLASAAPPAGGDKKVIATKVLGTV
KWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA
NVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQNYQNSESGEKNEGAENIPEGQAQ
QRRPYRRRRYPPYYMRRPYGRRPQYTNPPVQGEIVEGADNQGAGDGRPVRQNMYRGYRPR
FRSLTFRGPPRQRQPREDGNEEDKENQGDETQSQQPPQRRYRRNFNYRRRRPENPKPQDG
KETKTAEPPAENTSAPEAEQGGAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacccagccgcccgccgcccccgtccccgcggcggcccccgcc
gcccccgccgactccaagccaaacggcggcaccgggaacgggggcagcggcctggcctcg
gcggcgcctcccgctggcggggacaagaaggtcatcgcaacgaaggttttgggaacagtg
aaatggttcaacgtgaggaacggttacggcttcatcaacaggaatgacaccaaggaagat
gtgtttgtccatcagactgccataaagaagaataaccccaggaagtacctccgcagcgta
ggagatggagagaccgtggagtttgatgtggttgagggagaaaagggtgcggaggcagcc
aatgtcacaggacctggtggagttccagtgcagggcagtaaatacgcagcagatcgtaac
cattacagacgatatccacgtcgtaggggtcctccacgcaactaccagcaaaactatcag
aacagtgagagtggggaaaagaacgaaggagcagagaacataccagaaggtcaagcccag
caacgccgtccctatcgcaggcggcggtacccaccttactatatgcgtaggccctacggg
cgtcgtccacaatataccaaccctcccgtacagggagagatagtggagggtgctgacaac
cagggtgcaggagacggcagaccagtcaggcaaaacatgtaccggggttacagaccaaga
tttcgcagcttgactttcaggggtcctcctcgtcaaagacagcctagagaggatggaaat
gaagaagataaagagaaccaaggggatgaaacccaaagtcagcagccacctcaacgtcgg
taccgccgtaatttcaactaccgacgcagacgcccagagaaccctaaaccacaagatggc
aaagagacgaagacagccgaaccaccagctgagaacacgtccgctcccgaggctgagcag
ggcggggctgagtaa
DBGET
integrated database retrieval system
