Cinclus cinclus (white-throated dipper): 134053028
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Entry
134053028 CDS
T10813
Symbol
PEX1
Name
(RefSeq) peroxisomal ATPase PEX1
KO
K13338
peroxin-1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04146
Peroxisome
Brite
Membrane trafficking [BR:
ccic04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
134053028 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
AAA_5
RNA_helicase
DUF815
AAA_28
TIP49
AAA_33
ABC_tran
Sigma54_activat
AAA_29
AAA_18
AAA_22
AAA_2
TsaE
Sigma54_activ_2
NACHT
AAA_19
AAA_7
Bac_DnaA
CoaE
ATPase
Vps4_C
APS_kinase
Molydop_binding
T2SSE
DUF87
Motif
Other DBs
NCBI-GeneID:
134053028
NCBI-ProteinID:
XP_062363809
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All DBs
Position
1:complement(22942502..22968028)
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AA seq
1287 aa
AA seq
DB search
MWGCGDPGGATATIVLSGTRDCFLHLPPALASLLRLQQGQAVKVSCGHQPVFLSWMETRH
RGHQGENIAEINRHLAEKLGITDGEQVFLEPCSHVSSCQQVEVEPLTADDWEILELHASS
LERHLLDQIRVVFPRAIFPVWVEQHTHVYIRVGTLVPAAPYGRLEPCTELLVCPKTHGPE
ENITSTPATERDILLKNFVKNNMEQEETLRDPFAKQPYLKSGVLEQSKADANMMFGSNVL
PNIWNFIGNIFSNTAEPKQKTLCDNIEMSTFKDKLLNLIHMDSIFRVCQSQPPSVQNLST
AHEFLKCNAVHVFPWNLEYVDLDPNPVVSYGRINELLSPRQRHQEAKQNLPLEKQNHLTS
TQDKNPSNSSSSQASSEGSVVQIIWNGFEDLKSVIEYGHDGEALHVGRVWIADGLRKKLH
IEMHSTVRIKSVESIPKIPVSLTLQPKQNLHKDMHEDDVKCAFSSWLQDSTTDDHPWIMT
STDCVHLSVKEGMEEFVLSAAHPTCTEENKSENIFILSPSLLQKTNIQVLLHPLSRKADD
DNQPSMPDRAKNLPYHKLSDLGGVDKLGTSLFEHISHSLLGRPLSQKLAANAVGLRSGGV
LLTGGKGSGKSTLAKAICKEAFTRLDAHIEVIDCKALRGKRLVNIRKHVEEAFLEAAWRQ
PSILLMDDLDHIVGVPSTPEHENSPETVQSNRLAYVLKDLMKEIISMGSLIALIATSQSE
HSLHPSLVSAQGTHVFQCFECIRPPDQKQRYEMLHSIIKKKLNSDLKDFSDLDLQCIAKE
TEGFVARDFTMLVDRAIHTCASNQNASDNDDLNLSTVDFQKALKDFTPLALRNVSLHKPK
DLGWDRIGGLRDVKQMLRDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVVA
RESGMNFISIKGPELLSKYIGASEQSVRDIFNRAQAAKPCIVFFDEFDSIAPRRGHDNTG
VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQNSRYE
ILKALSHSLSLANDVDFQDLAAKTEQFTGADLKALLYNAQLEAIHNNLNLGLTQDFGSTS
DSDFSLSSMVFLNHSSGSDDSAIDEAGLEHSLISLDMSDLLPEDPRCNMYRLYFGSSYES
ELGNGTPSELSSLCLSGPNSITYDFTSITQRDVASSQPAMLRAASQEGSLENQEQQAELL
RTEINATKANYRSKNGEDSTLNQSMLPKTTLTVTQSHLMTALQGTRPSISQDDWKHFTEL
YDNFQNPKKRKVQIGTTFKPGQKMTLA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgtggggctgtggcgaccccggtggagccaccgccaccatcgtcctgagcgggacccgc
gactgcttcctgcacctgccgcccgcgctggcctcgctcctccgcctgcagcagggccaa
gctgtgaaagtatcctgtggtcatcaaccagtatttttgagctggatggaaaccaggcat
cgaggtcaccagggtgaaaatattgcagagattaatagacatttggcagagaaacttggc
atcacagatggcgaacaggtgtttcttgaaccctgttcccatgtgtcctcctgtcagcaa
gtagaggtggaaccacttacagcagatgattgggaaattctggaactgcatgcttcctcc
cttgagagacatcttcttgaccagattcgagtggtgtttccaagagccatctttcctgtc
tgggttgagcagcacacccatgtttacatcagagtcggtacacttgtgccagcagcccca
tatgggagattagagccatgtacggagcttctggtatgtcccaaaacacatggacctgag
gagaatatcaccagcacacctgccacagaacgtgacatcttgctcaaaaattttgtgaaa
aataacatggaacaagaagaaacattaagggatccttttgccaaacaaccttacttaaag
tctggagtccttgaacagagtaaggctgatgcaaacatgatgtttggctcaaatgttctc
ccaaatatatggaatttcatagggaacattttctctaatacagctgagccaaaacaaaag
actttgtgtgataacattgaaatgagcaccttcaaagacaagctgctgaacttaatccac
atggattccatttttagagtatgtcagtcccagcctcccagcgtacagaatctatccacc
gctcatgaatttctgaaatgcaatgctgttcacgtttttccatggaatttagaatatgtt
gatttggatccaaatcctgtagtatcatatgggagaattaatgagctgctttccccaaga
cagcgtcatcaagaagcaaaacaaaatctgccacttgaaaagcaaaatcatttgactagt
acacaagacaaaaatccttctaattctagtagcagtcaagcatccagtgagggatctgtt
gttcaaataatttggaatggatttgaagacctaaagagtgtcatagagtatggccacgat
ggggaagccctgcatgttggaagagtttggattgcagatggtctgagaaaaaagctacat
attgaaatgcattcaacagtccgaattaagtcagttgaatctattcctaaaattcctgta
tctcttacactgcagcccaaacagaacttacataaagatatgcacgaagatgatgttaaa
tgtgcattcagttcttggctgcaggattccactactgatgatcacccatggataatgaca
agcacagactgtgtacatctgtctgttaaagaaggaatggaggagtttgtccttagtgca
gcacatcccacatgcactgaagaaaataagtctgagaatattttcatactgagtcccagt
ttgctgcaaaagacaaatatacaagtacttttgcatcctttaagtagaaaagctgatgat
gacaaccagccatctatgcctgatagagccaagaaccttccataccacaaactaagcgat
ttaggaggagtggacaaattagggacatctttatttgaacacataagccacagtcttctg
gggcgtcctttatctcaaaagctggctgctaatgctgtgggactgcgaagtggaggggtg
cttctcacaggaggaaagggaagtggaaagtcaacattagcaaaggccatctgcaaagaa
gctttcactagactggatgctcatatagaagtaattgattgtaaagctttaagaggaaaa
agattagtaaacataaggaaacacgtggaagaagcttttttagaggcagcatggagacaa
ccatccattcttttgatggatgatcttgatcacattgttggagtaccttctacaccagag
catgagaacagccctgaaacagttcaaagcaatagacttgcttatgttttgaaagatctg
atgaaagaaattatttccatggggagcttgattgcattaattgccacgagtcagtctgag
cattcccttcatccttcattggtttcagcacaaggaactcatgtatttcagtgctttgaa
tgtatccgacctccagatcagaagcaaagatatgaaatgctgcattccataataaagaag
aaactgaattctgatctgaaggacttctctgatcttgacctccagtgtattgcaaaggaa
acagaaggttttgttgctagagattttactatgctggttgatcgtgccattcatacctgt
gcttctaaccagaatgcatcagataatgatgatttgaacctgtcaactgtggattttcaa
aaagctctaaaagattttactccactagctctgagaaatgtcagccttcataaacctaaa
gaccttggctgggacaggattggtggcttaagagatgtgaagcaaatgctcagggatacc
atcatgttacctgcaaagtatccagaattatttgcaaacctgcccatacgacagagatca
ggagttttgctgtatggagcacctggaacaggaaaaacactgttggcaggagtggttgcg
agagagagtgggatgaatttcatcagcatcaagggaccagagctgctcagcaaatacatt
ggagcaagtgaacaatcagtccgagatatatttaacagagctcaggcagctaagccttgt
attgttttctttgatgagtttgattctattgctcctcgccgaggtcacgacaacacagga
gttactgaccgagtggttaaccagctgttgactcagttagatggtgtggaaggcctgcaa
ggagtttatgtgctagctgctaccagtcgcccagatttgattgaccctgctttgttaaga
ccaggtcgactggataaatgcctgtattgtccacctcctgatcagaattcacgctatgaa
atcttaaaagctctcagtcattccctgtccttggcaaatgatgtggactttcaggatttg
gcagcaaaaacagaacagttcacaggggctgacctaaaagctttattatacaatgcccaa
ttagaggcaatccataataatttaaatttaggtttaacacaggattttggatctacttct
gatagtgacttcagtctctcttccatggtttttctgaaccacagcagtggctcagatgat
tcagcaatagatgaagcagggctagagcactctcttatttctttagacatgtctgacttg
cttcctgaagatccaaggtgcaacatgtatcgtctttattttggaagctcttatgaatca
gagctgggaaatggaactccttcagaactgagctctttatgtttgtccggtccaaactcc
ataacttacgactttaccagcatcactcagagagatgttgcatcctcacaacctgcaatg
cttagagcagcttctcaagaaggctccctggaaaaccaggaacagcaagcagagctcctg
aggacagaaatcaatgctaccaaggccaattacagaagcaagaatggagaggacagcacc
cttaaccagtcaatgcttcccaaaacaactttaactgttacccagtctcatctgatgact
gctcttcagggcacaagaccatccattagtcaggacgactggaagcattttactgaacta
tatgataattttcagaatcccaagaagaggaaagtacagattggcacaacattcaaacca
ggacaaaaaatgactctagcttag
DBGET
integrated database retrieval system
