Cinclus cinclus (white-throated dipper): 134053070
Help
Entry
134053070 CDS
T10813
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134053070 (VPS50)
Membrane trafficking [BR:
ccic04131
]
Protein recycling
Others
EARP complex
134053070 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
134053070
NCBI-ProteinID:
XP_062363878
LinkDB
All DBs
Position
1:23238869..23318289
Genome browser
AA seq
967 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVNDLSPIESFRIPTKEELRELHEEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITPDSYIPCLADLCKALWEVMLSYYRTMQWHEDHDQDEAAVVSSV
SDGNNVIGTEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAVSSSVTLFEQYCNGGNPFEIQADSKEDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRTRKRSDY
NLSKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVL
TSGSSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSSKQLTNLVNICLGTYINKKARQKLLATID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
aatgacctcagtcctattgaaagctttcggattcctactaaggaggagctcagagaactg
catgaagaaccaactgatcctcaggcacaacaggaaataattaacagcattgaagaagtt
tatttttccaatgactcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaaacagcctgcatatgttgaggaacttgaa
cgtgttacatcattgcagactggccttcagttagcagcagttatttgcacgaatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaactagtttggggctacttgcaaat
cagaggaaacgacagttgcttattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggattatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactatagttgtataagt
gagttaaattcaaaactgcaagacaccttggaacaaatagaggaacagttggacgtagca
ctttccaaaatatgcaagaattttgatatcaatcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacaccagacagc
tacattccatgccttgctgacctctgcaaagccctctgggaagtcatgctcagttactac
agaacaatgcagtggcatgaggaccatgaccaagatgaggcagcagttgtgtcttctgtt
tcagatggcaacaatgtgattggaactgaagagaacagttttgaccgcaattatgtaaaa
aagaaattggagcacgggctttcacgaatatggcaggatgttcaattgaaagtgaaaaca
taccttctgggaacagatctgtctaacttcaaatacgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaagttggagaagaattctgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtctt
gaagaactaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgaatttaagttcatggagcagtcgcgttccccgtccgtg
tcaccgagtaagcagcctgcctcagcagtttcatcatcagtgacactgtttgagcagtac
tgcaatggaggaaacccctttgaaattcaggctgacagcaaagaagatgagacagaagat
gtgctagcttccaatgggtatgaatcagatgaacaagaaaaaagtgcatatcaagagtat
gatagtgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccaataaaaagtgtttctcgagaaactctgaggaccagaaagagatcagattat
aacctcagtaaagtgaatgcacctattctaaccaacactacactgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaaacctattgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacgttttttggccgaaat
gacatgtttgaatcaacaggactgggcctcagtagcagcagattgcgcaccacactgaac
agaatccaggagagtctgattgatctggaggtgtctgctgatccttcaggaactctcaca
gctgctgaagagagaaaagagaaagtgccaagcccacatctcagtcatcttgtagttttg
acatctggaagttcactgtatggtttggcagagagagtggtggccacagaatccttggta
tttctggctgagcaattcgaatttcttcagcctcatcttgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttttattctcagacagtgtcaactgccagtgaactacgt
aaaccagtttattggattgttgctgctaaagccattgactatgaacaaatgcttcttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcacagcacaatgtatatgtggat
gctcttttaaaggaatttgaagaatttaacaggaggttgaatgaagtgtctaagagagtc
cgtattccattgccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatg
caactggattttcaacagttcttaatgaaactagagaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gaatcctggataaaagaacatagggaatattccagtaagcagttgaccaatctggtgaat
atttgtctgggcacctacatcaacaaaaaggcaagacagaagctgctagctaccattgat
gacatagacaggcctaagagataa
DBGET
integrated database retrieval system
