Cinclus cinclus (white-throated dipper): 134053087
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Entry
134053087 CDS
T10813
Symbol
CASC3
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03013
Nucleocytoplasmic transport
ccic03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134053087 (CASC3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134053087
NCBI-ProteinID:
XP_062363899
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Position
24:complement(5087050..5098510)
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AA seq
721 aa
AA seq
DB search
MADRRRQRASQDSEDSEGSAASDSAGSPPGSPRSARSRSGSGSRSRSGSPRLPHRPPRGA
AGALGAGPRSRGAESAGGAGVKSAAESECESEDGIEGDAVLSDYESAEDSEVEEEDYSEE
ESSKVELKQDSNDSCESAARGEKGNEKVDPKGAVTGERQSGDGQESTEPVEKKVGKKVPK
HLDDDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQ
APKTRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQGAK
SPSTPPRSYNSRSSASTGRMPPARNYPRMGGYKETRPGYRASEAAVPHRNGEQAKQESGY
RGKRAEQSPSRDTSPELEVVHIHGSPGKEEGALENQATAADAAQPPPDRPVEKKSYSRAR
RTRVKAGEAGKLAEEVPASEGLAPVIPKPTPPETSPPPAKSNWESPVESSVDGLEQEMTQ
MNLTEQNWSPGQSQFIPPRELRGIPNHMHVGTGPPSQFNRMEEMAVPGGRVKRYSSQRQR
PPVPEPAPPMHISIVEGHYYDPLQFQGPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHPH
QTPPAMANPGLYPPPVSMPPGQPPPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSN
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacagcgagggctcggcg
gcctccgacagcgctggctccccgcccggctccccccgctccgcccgctctcgctcgggc
tccggatcccgctcccggtccggctcgccccgcctgccgcatcgcccgccgcgcggcgcc
gcgggggccctcggcgctgggccgcggagccgcggggccgagagcgccggtggggcgggg
gtgaagagcgcggccgagtcggagtgtgaaagtgaggatggcatcgaaggagatgccgtg
ctctctgactatgaaagcgccgaggactcagaggtagaggaagaggattacagtgaggaa
gaaagctccaaggtggagctaaagcaggacagcaacgattcctgcgagtcggctgccaga
ggggagaaggggaatgagaaggtggatcccaagggagccgtgacgggcgagcggcagagc
ggggacgggcaggagagcacggagcctgtggagaagaaagttgggaagaaggttcccaag
cacctggatgacgatgaggatcggaagaacccagcgtacatcccacgcaaggggctcttt
tttgagcatgacctccgagggcagacacaggaggaggaggtcaggccaaagggtcgtcag
cggaagctgtggaaggacgaggggcgctgggaacacgacaagttccgtgaggatgagcag
gcccccaagaccaggcaggagctgatcgcgctgtatggatacgacatccggtcagcccac
aaccctgacgacatcaaaccccggaggatgcgcaaaccacggtttggcagcccccctcag
cgagaccctaactggtccaacgagaggccccccaagcccccgaggcatcagggtgccaag
agcccctcgactcccccacggtcctacaacagccgcagttctgccagcactggcaggatg
ccccctgccaggaactaccccaggatggggggctacaaggagacccgcccaggctaccgg
gcttcggaggcagctgtcccacaccggaacggggagcaagccaagcaggagagtggctac
cgtgggaagcgtgcagagcagagcccgtcaagggacacgtcccctgagttggaggtggta
catatccatggcagccctgggaaggaggagggggctctggaaaaccaagccacggctgct
gacgctgcacagccaccaccggacagaccagtcgagaagaaatcttattcccgggcaaga
aggaccagagtcaaagctggggaggcggggaagctggcagaggaagtgcctgcttctgag
ggactggctcccgtgattccaaaacccacacctcccgagacctcccccccgccagccaag
agcaactgggagtcaccggtggaatccagcgtggatggacttgagcaggagatgacccag
atgaacctgacagagcagaactggagcccgggccagtcccagttcatcccgcctcgggag
ctgaggggtattcccaaccatatgcacgtgggaactgggccaccatcacaatttaaccgg
atggaggagatggcagtgcctgggggccgtgtgaagcgctactcatcgcagcggcagaga
ccccccgtgccagagccagcaccccccatgcacatcagcattgtggaaggacactactac
gacccattacaattccagggaccaatctacacccacggtgagaacccagccccgctgccg
ccccaagggatgattgtgcagccggagatgcacctccctcatccaggtttacacccccac
cagacgccccctgccatggcaaaccccggcctctaccccccgccagtgtccatgcccccg
ggccagcccccgccgcagcagctgctcactccgacttacttctcagcccctggagtgatg
aattttgggaatcctggctacccgtaccctcctggagctctgccccctccgccccctcct
catctctattccaacacacaggcgcagtcccaggtgtatgggggggtcacctactacaac
actgtccagcagcaggtgcagcccaagccctccccgcctcgccggacgtcccagcctgtg
accatcaagccgccccctccagaggacagcaaaggtgaaaaatcaaaggagaggagcaac
acgtaa
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