KEGG   Cinclus cinclus (white-throated dipper): 134053206
Entry
134053206         CDS       T10813                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic04137  Mitophagy - animal
ccic04144  Endocytosis
ccic04145  Phagosome
ccic04148  Efferocytosis
ccic05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    134053206 (RAB5C)
   04145 Phagosome
    134053206 (RAB5C)
   04137 Mitophagy - animal
    134053206 (RAB5C)
   04148 Efferocytosis
    134053206 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    134053206 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccic04131]
    134053206 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccic04147]
    134053206 (RAB5C)
   04031 GTP-binding proteins [BR:ccic04031]
    134053206 (RAB5C)
Membrane trafficking [BR:ccic04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    134053206 (RAB5C)
 Endosome - Lysosome transport
    134053206 (RAB5C)
Exosome [BR:ccic04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134053206 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   134053206 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   134053206 (RAB5C)
  Exosomal proteins of bladder cancer cells
   134053206 (RAB5C)
GTP-binding proteins [BR:ccic04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    134053206 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 134053206
NCBI-ProteinID: XP_062364063
LinkDB
Position
24:4527587..4539323
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQSAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatttgc
cagtttaaacttgttctcttgggcgagtctgcggtggggaagtccagcctggtcctgcgc
tttgtgaaggggcagttccacgagtaccaggagagcacaattggagctgccttcctaaca
cagacagtgtgtctggatgacacgacagtgaagtttgagatctgggacacggcggggcag
gagcgataccacagcctggcccccatgtactaccggggggctcaggcagccattgtggtc
tacgacatcacgaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagccccaatattgtaattgcactagcaggaaacaaggcagaccttgctaac
aagagagctgtggacttccaggatgcacaaacatatgcagatgacaacagcttgctgttc
atggagacgtcagcgaagacagcaatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagagtgctcctggtggcccaggcaggaatcgggtggtg
gaccttcaggagagcagccagccgagcagaagccagtgctgcagcaactga

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