Cinclus cinclus (white-throated dipper): 134053271
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Entry
134053271 CDS
T10813
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
134053271 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
134053271 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
134053271
NCBI-ProteinID:
XP_062364165
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All DBs
Position
1:complement(29422138..29484828)
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AA seq
988 aa
AA seq
DB search
MLTETSLSIWGWGSLVLFLATFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLEQC
EHSFLPCTSVGIPKCIEEMKRETRPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWYYT
LSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIAEK
GNQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGDFQ
NKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNIGE
LEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTVKL
AANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVLQS
RQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPEIF
DDVQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPTGS
INLSLDDLSNVPSDETVQFHAYISDTVYADSDPYAVAGVCNDHGKTYALYAITVHRRNAN
SEEMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAYLQ
LLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSIP
DSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCRVAAPIDDNVDDNI
PLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVA
DAVKRFRDAFWPNGILAEAVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRKGI
LRVFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFNKLHSRSKQMQRYKQRLHSTQA
PSLQKRMWLPNSVVPVGWQEPSEMSTFC
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagagaccagtctttccatatggggatggggaagtcttgtgctttttctagca
acttttggacccttcgctatattttactttgcattttatatcctctgctttgtgggtggg
ggttttgtggttactcttttatttggaaaaagcaattcagaaaaataccttgagcagtgt
gaacattcgtttctcccttgtacatcggttgggatccctaagtgcatagaagaaatgaaa
cgtgagaccagacctattaagattgatagaagactgacaggtgcaaacataattgatgaa
cctctgcaacaggtaatacagttttccctgagagactatgtgcagtattggtattataca
ctaagtgatgatgaatcctttcttctggaaattaggcaggctcttcagtatgcacttgtt
cagttttctgccaggtccaaggaaacagactggcagccttatttcactacacgacttgtt
gatgactttggcactcatcttcgagttttcagaaaagctcagcaaaggatagcagaaaaa
ggcaatcagatgaaagatcaagctgaggaacttgtagatacattctttgaggttgaagtt
gaaatggaaaaagaagtctgtcgtgatctagtctgcacttctcccaaagatgaagaagga
ttcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagacttccag
aacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattcttcttccatta
ataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgattcgtgat
tccaactgtaactatgaggcctttatgaatattattaaattaagtgataatataggagag
ttggaagcagtgaaagacaaagcaagtgaagaattgcaatatcttcgatctctagataca
gcaggagatgatatcaacactataaaaaatcaaataaacagtttattatatgttattaaa
gtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtgaaactg
gcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagacaatgtt
gcactacagttttttatggattacatgcagcaaactggtggccaagcacatctgtttttc
tggatgacagtggaaggatacagggttacagcacagcaacagctggaggtacttcagagc
cggcagaaagatggaaaacatcagactaatcagaccaagggtctattaagagcagctgca
tttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatattgatgac
aacttagtagcaaaacttgcagaaacactgaaccatgaggatccaacacctgaaatcttt
gatgacgttcagagaaaggtgtatgagttgatgctgcgagatgagaggttctacccttcg
ttcaagcagaatgtgttgtatgtgcgtatgttagctgagctggatatgctgaaggatccc
agtttcagaggatcagatgatggtgaaggagaatcttttaatgggtctcctactggcagc
ataaatctgtccttagatgacctttcaaatgtcccttctgatgagacagtccagttccat
gcatacatctcagatactgtctatgctgactctgacccatatgctgtggcaggagtgtgt
aatgaccacggcaagacatacgccctgtacgccatcaccgtgcaccggcgaaacgcaaac
agtgaggagatgtggaagacgtatcggcgttacagtgacttccatgacttccacatgagg
atcactgagcagtttgaaaaccttgcaaatatattaaaacttcctggaaaaaaaacattt
aataatatggacagagagtttttggaaaagaggaaaaaagatttaaatgcttatttgcag
ctcttgttaaatcctgaaatgatgaaagcttctccagctttagcccattatgtgtatgac
ttcctagagaataaagcctacagcaaagggaagggggattttgcacggaagatggacaca
tttgtaaatccactgcgtaactctatgagaaacgtatcaaatgcagtcaagtctatccct
gacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtcagagaga
ctgggacaagacataaagcaatcatttttcaaggtaccacctctgatgcagaaaacctat
tcagatcctgaccattgtcgtgttgcagcaccaattgatgacaatgtggatgacaatatt
ccactgagagtaatgctcctacttatggatgaagtctttgatttaaaggagagaaatcag
tggttaagaagaaatataaagaatctgcttcagcaacttattagagcaacatatggtgac
acaattaatagaaaaatagttgatcatgttgattggatgacatctcctgagcaagtagca
gatgcagtgaaacgcttcagagatgctttttggcccaatggcattttagcagaagcagtt
ccacgaagggacaaagctattagaatgagaacaagagttgcagggaaaaccaaattgctg
gaggtaatgccagatgaactgaagcacatcataggcgctgagactacgcggaaaggcatt
cttcgagtctttgaaatgttccagcatagtcagctgaataagagaatggtgtatgtgttt
ctggagagattcctagaaacattatttccacaaaataagttccccgagctgttcaacaaa
ctgcattcaaggtcaaagcaaatgcagagatataagcagagactacattctactcaagcg
ccttccttacagaaaagaatgtggcttcctaattcagtggtgcctgttggctggcaagaa
ccatcagaaatgagtactttctgttaa
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