Cinclus cinclus (white-throated dipper): 134053277
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Entry
134053277 CDS
T10813
Symbol
PSMC5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
134053277 (PSMC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ccic03051
]
134053277 (PSMC5)
Proteasome [BR:
ccic03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
134053277 (PSMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
AAA_17
FapA
IstB_IS21
PhoH
AAA_24
AAA_7
AAA_25
DUF815
DUF7006
Sigma54_activat
bpMoxR
ABC_tran
DUF5906
RNA_helicase
AAA_11
Zeta_toxin
AAA_19
TsaE
HR1
Motif
Other DBs
NCBI-GeneID:
134053277
NCBI-ProteinID:
XP_062364180
LinkDB
All DBs
Position
24:complement(835149..839162)
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AA seq
411 aa
AA seq
DB search
MPAEKMAWDGPEQMEMDDGKGGSGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAK
VRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVA
LRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELF
EALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF
VMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMAT
NRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGAS
GAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggagaagatggcgtgggacgggcccgagcagatggagatggacgacgggaaa
ggcggctcggggctccggcagtattacctgtccaagatcgaggagctgcagcttattgtg
aacgagaagagccagaacctgcggcggctgcaggcgcagaggaacgagctcaatgccaag
gtgcggctgctgcgggaggagctgcagctcctgcaggagcagggatcctatgtgggagag
gtggtgagagccatggacaagaagaaggtgctagtcaaggtgcacccagagggaaagttt
gtggtggatgtggacaagaacattgacatcaatgatgtgacccccaactgccgtgtggcc
ctgcgcaatgacagctataccctgcacaagattctgcccaacaaggtggacccactcgtg
tccctcatgatggtggagaaggtcccagactctacctatgagatgattgggggcttggac
aagcagatcaaagagatcaaggaggtcatcgagctgcccgtgaagcacccagagcttttt
gaggcgctgggcatcgcccagcccaagggggtgctgctctatggcccccccggcacaggg
aagaccctgctggccagggctgtggcccatcacaccgactgcaccttcatccgtgtgtcc
ggctccgagctcgtgcagaagttcatcggggaaggggcccgtatggtgcgggagctgttt
gtgatggcccgggaacacgcgccctccatcatcttcatggacgagatcgactccatcggc
tcctcccgcctggagggcggctcgggcggggacagtgaggtgcagcgcacaatgctggag
cttctcaaccagctcgatggcttcgaggccaccaagaacatcaaggtgatcatggccacc
aacaggatcgacatcctggactcggccctgctgcgtcccggccgcattgacagaaaaatc
gagtttccccctccgaatgaggaggcccgcctagacatcctcaagatccactcccggaag
atgaatctgacccggggcatcaacctgcggaaaatcgcggagctgatgccaggggcgtcg
ggggctgaggtgaagggggtgtgcacagaggcagggatgtatgcactgagggagaggagg
gtgcatgtcacacaggaggactttgaaatggccgtggccaaggtgatgcagaaggacagt
gagaagaacatgtccatcaagaagctgtggaagtaa
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integrated database retrieval system
