Cinclus cinclus (white-throated dipper): 134053306
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Entry
134053306 CDS
T10813
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134053306 (MED1)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
134053306 (MED1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
134053306
NCBI-ProteinID:
XP_062364237
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All DBs
Position
24:5370517..5388042
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AA seq
1582 aa
AA seq
DB search
MKAAPGSAEEVEKLNKMSSLLERLHAKYSQNRPWTETMKLVRQVMEKRVVLNSGGHQHLV
SCLETLQKALKVSSLPAMTDRLESIARQSGLGSHLSANGTECYITSDMFYVEVQLDPTGL
LCDVKVAHHGENPVSCPELVQHLREKNFDEFSKHLKGLVNLYKLPGDNKLKTKMYLALQS
LELDLQKMAGMYWQATNANPLDKILHGSVGYLTPRSGGLLMNLKYYVSPYDLFEDGTGAP
MVLHENNVPRSLGMNVSVTVEGTMAMHKLPIAPLIMGSHPVDSKGTPSFSSITSANSVDL
PACFFLKFPRPIPVSRAFIQKLQSCTGIPLFDTAPMFVPLYELITQFELSKEADPLPLNH
NMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLISKIAFQHPGRVPLILNLIRHQVAYNT
LIGSCVKRTVLKEDSPGILQFEVCPLSDSCFSVSFQHPVNDSLVCVVMDVQDSSHVNCKL
YKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKN
LPPASSPGYGMTTGSNPMSGTTTPTNTFPGGPITTLFNMSISMKERHDSVGHGEDFSKVS
QNPILTSLLQITGNVGSTIGSSPTPPHHTPPPVSSPASNTKNHPMLMNLLKENPPQDFST
LYGSSPLERQNSSSGSPRMEMGPGGNKQKKKKSRMPADKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQALPHAQPSIQRMVRLSSSDSIGADVT
DILSDIAEEASKLPTSTEDCPPIGTPVRDSSSSGHSQSALFDPDVFQTNSSENPYTDPAD
LIADAAVSPNSDSSNHFFPDGVDFNPDLLNSQSQSGFGEEYFDESSQSGDTDDFKGYAPQ
ALTNLGVQVLGADGGENKFKGSTPSDTVDFSIIAAASKALGSSDIMEHHSGGQSPLLNTG
DLGKEKSQKRVKEGNGSGSAMAGAGIDGKPGKRSRTPSSDGKSKEKLPKRKKQETDGKSP
SHSSSNRPFTPPASTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVTVGKPSSHGQ
YTSSGSVTSSSSKSHHSHSSSSSSSSSSSTSGKIKSKSEGSSGSKMSSSLYSSQGSSGSG
QSKGSAQSVGKPGSSPITKHGLSTASGSTKMKPQGKPSSLMNPSMSKPNISPSHSRPSGC
SEKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTGSSSSMKSSSGMGSSGSMSQKPPP
SSSSSTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPGG
DDPMDGQMGPSSNSSSHTMSSKHNMSGGEFQGKREKSDKEKSKVSVSGGSVDSSKKNSDS
KNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGEGGGDGLRPQMASSKSYGSPLISGSTP
KHERCSPSHSKSPAYTPQNIDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSAEKHKKHK
KEKKKVKDKDRDRERERDKDRDKKKSHGMKPESWSKSPISADQSLSMASNAILSAERPSR
ASPEFLIGEEDDDLMDVALIGN
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcgccgggcagcgccgaggaggtggagaagctgaacaagatgagctccctt
ctggaaaggctccacgccaagtacagccagaaccggccctggacagaaaccatgaagttg
gtccgtcaggtcatggaaaagcgagtggtgctgaactcgggggggcaccagcacctggtg
agctgcttggagacactgcagaaggccctcaaagtgtcatctctgcctgccatgactgat
cgcttggagtccattgccaggcagagcggcctgggatcccacctgagtgcgaacggcacc
gagtgttacatcacctcagacatgttctatgtggaggtgcagctggaccctacagggctg
ctctgtgatgtcaaggtggctcaccatggagaaaaccccgtgagctgtccagagctggtg
caacatctgagagagaaaaattttgatgagttttcaaagcatctgaagggacttgtgaat
ctgtataaactgccaggggacaacaaacttaaaactaaaatgtacttggctctgcagtcc
ttggagttggatctccaaaagatggctgggatgtactggcaagccaccaatgcaaacccc
ctggacaagatcctccatggcagtgttggctatctcacccccaggagtggaggtctgctg
atgaacctcaaatattatgtctccccctatgatttatttgaggatggcactggagccccc
atggttttgcatgagaacaatgttcctcgctcgctgggtatgaacgtgtcggtgacagtt
gagggaaccatggcaatgcacaaacttccaattgctccactgatcatgggctcccatcct
gtggacagcaaaggaactccatccttctcctccatcaccagtgccaacagcgtggacttg
ccagcttgtttcttcctgaaattcccacgtcccattccagtgtctcgagctttcatccag
aagctgcagagctgcacaggtatcccactgtttgacacagcacccatgtttgtgcccctg
tatgagctgatcacgcagtttgagttgtccaaggaggctgatcccctgcccctgaaccac
aacatgcgcttctacgccgctcttccaggacagcagcactgttacttcctgaacaaagat
gctcctctcccggatggacgaagcctgcagggaactctgatcagtaaaattgctttccag
caccctggcagggtgcccctcatcctcaacttgatccggcaccaggtggcctacaacacc
ctcattggcagctgtgtcaagaggacagtcctgaaggaagattctcctgggatcctgcag
tttgaagtttgtcctctctctgactcctgtttcagtgtatccttccagcaccctgtgaac
gactccctggtgtgtgtggtgatggatgtgcaggactccagccatgtgaactgtaagctg
tacaaaggactgtctgatgccctcatctgtacagatgatttcattgccaaagttgttcaa
aggtgcatgtccatccctgtcaccatgagagccatccgtaggaaagcagaaaccatccaa
gctgacacaccagccctgtccctcattgcagagacagttgaagacatggtgaagaaaaat
ctgcctccagccagcagcccagggtatggcatgaccacaggcagcaacccaatgagtggg
accaccaccccaaccaacacttttcctggggggcccatcactactttgtttaacatgagc
ataagcatgaaagagaggcatgactcggtgggccatggggaggacttcagcaaagtgtct
cagaaccctattctcactagtttgttgcagatcacagggaatgtggggtctaccattggc
tcaagtccaaccccaccccaccacacaccaccaccagtatcctcaccagccagcaacacc
aagaaccaccccatgctcatgaaccttcttaaggagaatccccctcaggatttctccact
ctatatgggagcagccctctggaaaggcagaactcttcctctggctcccccagaatggaa
atgggccctggggggaataaacaaaagaaaaaaaaatcccgcatgccagccgacaagccc
aagcaccagactgaggatgatttccagagggagctcttttctatggatgttgactcccag
aaccccatttttgatgtcaacatgactgcagacaccctggacacccctcatattactcca
gcacccagccagtgcagcactcctcccaccacgtacccccaggcgctgccccacgcgcag
cccagtatccagaggatggttcgcctgtccagctcggacagcatcggggccgatgtcacc
gacatcctctccgatatagcagaggaggcttccaagctgcccaccagtactgaggactgc
ccacccattgggactccagtcagagactcttctagttcaggacattcacaaagtgccctc
tttgaccccgatgtttttcagaccaacagtagtgagaacccctacacagaccccgcagat
ctgattgcggatgctgctgtgagccccaacagcgactcctccaaccacttttttccagat
ggagtagatttcaaccctgatttgctgaacagtcagagccagagtggttttggggaggaa
tactttgatgagagcagtcagagcggtgacactgatgatttcaagggctatgccccccag
gctctaactaatttgggggtgcaagtcttgggggctgacggaggggaaaataaatttaag
gggagcactccgtccgatacggtggattttagtattattgcagctgccagcaaagcactg
gggtcctctgacatcatggagcaccacagtggaggccagagccctttgctgaacacgggg
gatttaggaaaagagaagtctcagaaacgggtaaaggaaggcaatgggtctggaagtgcc
atggcaggtgctgggatagatgggaagccagggaagcgcagccggacgccatccagtgat
ggcaaaagcaaagagaaacttccaaagaggaagaagcaggagacagatgggaaatctcca
tcccacagttcatccaacaggcccttcacgccaccagcaagtacaggtgggtccaaatct
ccggggagttcgggcagatcccagactcctcctggggtcgctactcctcctattccaaaa
ataaccattcagatcccgaaaggaacagtgactgttggcaaaccatcttcacatggccag
tacacgagtagtggttctgtcacctcctccagcagcaaaagccatcatagccattcttcc
tcctcctcctcttcttcctcctcttcaacctcaggcaaaattaaaagcaaatcagaaggg
tcttctggctcaaagatgagcagcagcctctactccagccaaggcagctccggttcgggt
cagtccaagggctcagcccagtcagtgggaaagccaggatcctcccccatcaccaaacac
ggcctcagcaccgcctctggcagcaccaagatgaaacctcaaggaaagccatcatccctc
atgaacccttccatgagcaaaccaaacatctccccatcccactcgagaccctcggggtgt
tctgagaaacttgcctctcccatgaaacctgtcccaggtactcccccgtcatctaaagca
aagtcacccatcagttcaggttctggtgggtcccacatgtctgggactggatcaagctca
agcatgaaatcgtcttcaggaatgggatcctctgggtctatgtcacagaaaccgcctccc
tcgtccagttcctccacggcctcttcctcttccttttcatccagtgggtcttccatgtct
tcatcccagaaccagcatggaagctccaaaggcaagtccccaagtagaaacaagaagcca
tcactgactgcagtcattgacaagctgaagcacggggtggtcacgagcgggcctggcgga
gatgaccccatggatggacagatggggccgagttccaattcctcaagccatacaatgtcc
tccaaacacaacatgtctggaggggagttccagggaaagcgggagaagagcgacaaggag
aaatcgaaggtctctgtttctggaggatctgttgactcttccaagaagaactcggattcc
aaaaacgttggaagcactggagtggccaaaattatcatcagcaaacacgatggtggttcc
cccagcattaaagccaaagtaactctacagaaacctggggaagggggtggggacggcctg
aggcctcagatggcttcttccaaaagctacggatcccccctgatcagcggctccaccccc
aaacacgagcgctgctcccccagccacagcaaatccccggcctacaccccccagaacatc
gacagcgagagcgagtcgggctcttccatcgctgagaaatcttaccagaacagccccagc
tccgacgacggcatccggcccctgcccgagtacagcgccgagaaacacaagaagcacaaa
aaggagaagaaaaaagtgaaagacaaagaccgggacagagagcgggagcgggataaggac
agggacaagaagaaatcccatggcatgaagcctgagagctggtccaagtcgcccatctcg
gcagatcagtctctgtccatggcgagcaacgcgatcctctcggccgagcggccgtcccgg
gccagccccgagttcctgatcggggaggaagatgatgatctcatggatgtcgctctgatt
ggcaattaa
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integrated database retrieval system
