Cinclus cinclus (white-throated dipper): 134053390
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Entry
134053390 CDS
T10813
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
134053390 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134053390 (HDAC5)
Enzymes [BR:
ccic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
134053390 (HDAC5)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
134053390 (HDAC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
134053390
NCBI-ProteinID:
XP_062364386
LinkDB
All DBs
Position
24
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AA seq
1069 aa
AA seq
DB search
MDPQSDAEGGSSHESPLELLPRVPLHAALPTPACLVGPEGPEGPGPDAGVDAGLAAAREQ
QLQRELVALKQQQQLQKQLLFAEFQKQHEHLTRQHQVQLQKHLKQQQEALAARRQQELER
QRQRERQELEQQRLEQLQSLRPKDRGRDSAIASTEVKLKLQEFLLSKTKDPGPGPPNHSL
PQHPKCWAHHTSLDQSSPPQTGSPGTPPSYKLPLLGTYDGRDDFPLRKTASEPNLKVRSR
LKQKVAERRSSPLLRRRDGSVLSAFRKRHVEITVSSVCSSAPGSGPSSPNSSHGAHNGLA
ASVPNIHSEQLLPQPHALALDGAQLSLYTSPSLPNLSLGLQATVTVTSAHLPVSPKLSPQ
AEGERPGVPPGVSPLRPGAALTGKFLSTSSIPGCLLGVALDGDTPAGSPSLLQHVLLLEQ
ARQQSTLIAVPLHGQSPLVTGERGGGPRGSKVPRHRPLSRTQSSPLPQSPQALPHGPLQH
HFLDKQQVQLGKLLPKGGELARQPPTHPEETEEELTEQQSPPPGERGPLGPPLGPPLALL
SPEAGDPPEQPQDPEGCQEPGDSGDEAEATGDPDVTELGVTYKQVYPEAPLQLFPAPPLG
VLALPHPALARTQSSPASVKPPQPEGPPKHLFTTGVVYDTFMLKHQCTCGNTTIHPEHAG
RIQSIWSRLQETGLLGKCERIRGRKATLEEIQTVHSEHHTLLYGTSPLNRQKLDSKKLLG
PITPKTYAVLPCGGIGVDSDTVWNELHSSSAVRTAVGCLLELAFKVAAGEVKNGFAVIRP
PGHHAEESTAMGFCFFNSVAISAKLLQQRLSVGRILIVDWDIHHGNGTQQAFYSDPHVLY
ISLHRYDDGNFFPGSGAPEEVGSGLGVGYNINIAWTGGVDPPIGDVEYLTAFRTVVMPIA
NEFSPDLVLVSAGFDAVEGHLSPLGGYSVTAKCFGHLTKQLMMLAGGRVVLALEGGHDLT
AICDASEACVTALLGLELEPLDPALLQQKPNVNAVATLEKVIEIQSRHWGSVRRFAAAVG
RSLLEAQRGDTEEAETVTAMALLSVGAEQGGTDTQPRSAEEPMEAEPTL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggacccccagagcgacgcagagggggggtccagccatgagtccccgttggagctcctg
ccccgtgtcccgctgcacgctgccctgcccaccccagcgtgtctggtagggccggagggg
ccggaggggccggggccggacgcgggggtggacgcggggctggcggcggcgcgggagcag
cagctgcagcgggagctggtggccctgaagcagcagcagcagctccagaagcagctgctc
ttcgccgagttccagaagcagcacgagcacctcacccgccagcaccaggtccagctccag
aagcacctcaagcagcagcaggaggctctggccgcccgccggcagcaggagctggagcgg
cagcggcagcgggagcggcaggagctggagcagcagcgcctggagcagctccagagcctg
cgccccaaggaccggggccgtgacagcgccatcgccagcacggaggtgaagctgaagctc
caggaattcctgctcagcaagacaaaggatccaggccccggcccccccaaccattccctc
ccccagcaccccaaatgttgggctcaccacacctcgttggaccagagttcccccccccag
accggcagcccggggacccccccatcctacaagctccccctcctcggcacctacgacggc
cgcgatgatttccctctccgcaaaaccgcgtcggagcccaacctgaaggtgcggtcgcgg
ctgaagcagaaggtggcggagcggaggagcagccccctcctgcggcgccgcgacggctcc
gtgctcagcgccttccgcaagcgccacgtcgagatcaccgtgtcatcggtttgcagcagt
gcccccgggtcggggcccagctcccccaacagctcccacggtgcccacaacggcctggcc
gcctctgtccccaacatccacagcgagcagctcctgccccagccccacgccctggccctg
gacggggcccagctcagcctctacacgtccccatcgctgcccaacctgtccctggggctg
caggccactgtcaccgtcaccagcgcccacctccccgtgtctcccaagctgtcgccacaa
gcggagggcgagcggccgggggtgcccccgggggtgtccccgctgcgccccggggccgcc
ctcaccgggaagttcctgagcacctcctcaatcccggggtgcctgctgggggtggccctg
gatggggacacccccgccgggtccccatcgctgctgcagcacgtgctgctgctggagcag
gcgcgccagcagagcaccctcattgctgtgcccctgcacgggcagtccccgctggtgacg
ggggagcgcggtgggggtccccgcgggagcaaagtgccgcggcaccgacccctgagccgc
acgcagtcatcgccgctgccccagagcccccaggccctgccccacggccccctccagcac
cacttcctcgacaagcagcaggtccagctgggcaagctgctccccaaggggggggagctg
gcacggcagccccccacccaccccgaggagacagaggaggagctgacggagcagcaatcg
ccccccccgggtgagagaggccccctcggtccccccctcggcccccccctcgccctcctg
tccccagaggctggggaccccccggagcagccacaggaccccgagggctgccaggagccg
ggtgacagtggggacgaggccgaggccaccggggaccccgacgtcactgagctgggggtc
acctacaagcaggtgtaccccgaggcgccgctgcagctcttccctgcgccccccctgggg
gtcctggctctgccccaccctgccctggcccgaacccaatcgtccccggccagcgtcaaa
cccccccagcccgaggggccccccaagcacctcttcaccacaggtgtggtgtacgacacg
ttcatgctgaagcaccagtgcacctgtgggaacaccaccatccaccccgagcacgccggg
cgcatccagagcatctggtcccggctgcaggagacggggctgctggggaagtgcgagcgc
atccggggcaggaaggcgactctggaggagatccagaccgtgcactcggagcaccacacg
ctgctctacggcaccagccccctgaaccgccagaaactggacagcaaaaagctgctgggt
cccatcactccgaagacgtacgcggtgctgccgtgcgggggcatcggggtggacagtgac
acggtgtggaacgagctgcactcgtccagcgcggtgcgcacggccgtgggctgcctgctc
gagctggcctttaaggtggccgcgggggaggtgaagaatggctttgctgtcatccgcccc
ccaggccaccacgccgaggagtccacggccatgggcttctgcttcttcaactcggtggcc
atctcggccaagctgctgcagcagcggctcagcgtgggcaggatcctgattgtggactgg
gacatccaccatggcaacgggacccagcaggccttttacagcgacccccacgtgctctac
atctccctgcaccgctacgacgacggcaacttcttccccggcagtggagcccccgaggag
gtgggcagcgggctgggcgtgggctacaacatcaacatcgcctggaccggcggcgtggac
cccccgataggggacgtggagtacctgacagccttcaggactgtggtgatgcccatcgcc
aacgagttctccccggacctggtgctggtctctgcgggcttcgacgccgtcgagggccac
ctgtccccgctcggtggctactccgtcaccgccaagtgttttgggcacctgacgaagcag
ctgatgatgctggcggggggccgggtggtgctggcgctggaggggggacacgacctgaca
gccatctgtgacgcctctgaggcctgtgtcactgccctgctcggcctcgagctggagccc
ctggacccggccctgctgcagcagaagcccaatgtgaacgcggtggccacgctggagaaa
gtcatcgagatccagagccgccactggggctccgtgcgtcgttttgccgccgccgtgggc
cgatccctgctggaggcacagcgtggggacaccgaggaggccgagacggtgacggccatg
gccctgctgtccgtgggggccgagcagggagggacggacacacagcccaggtcagctgag
gagccaatggaggccgagcccacgctctga
DBGET
integrated database retrieval system
