Cinclus cinclus (white-throated dipper): 134053572
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Entry
134053572 CDS
T10813
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134053572 (DSCAML1)
Cell adhesion molecules [BR:
ccic04515
]
Immunoglobulin superfamily
Other
134053572 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
134053572
NCBI-ProteinID:
XP_062364628
LinkDB
All DBs
Position
25:6441838..6534677
Genome browser
AA seq
2043 aa
AA seq
DB search
MWLVTFLLLYSLPKAHAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAILRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVRAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVTGPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNLQ
GWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEVFLTELREATWYELRMKACNSAGCGN
ETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIACPVILATLGVALLFIIRKKRKEKRL
KRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKAT
IPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTR
NRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDKGRNSMVST
ESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTTDNADSMTSMSTP
SEPGICRFTASPPKPQDSERGKGVAVPIPHRASKSDYCNLPLYVKSEAFFRKPDAHEPCP
VVPPREASIRNLARAYHAQARHMTLEPGAKPLGLPPPASAATTLPQRTLPMPGPAGPAPA
PAAGAAPAPPVAAEPPVAAAEARVPTHSKVGGSRDSLLEMSTSGVGRSQKQGAGAYSKSY
TLV
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttctcctgctgtactctttgccgaaagcacacgctgaagatgtt
ggaaccagcctctactttgtgaacgactccctgcagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccatccttcggtggtacctg
gccacaggtgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcagagaactcggctggcaaaatcaggagcccaaatatccgtgttaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatatgttagcgttgtatcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacacggcagagcaacggcgcccggctctccgtctcagacccg
gcggagtccatccccacgatgttagacagcttccagtcccgggaggtgagggcgggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtgcggtggatcaag
gacgggcggccgctccccgccgacagccgctggaccaagcgcatcacggggctgaccatc
agcgacctgcgcgtggaggacagcggcacctacatctgcgaggtgaccaacaccttcggc
tccgcagaggtcacggggaccctcacggtcatagaccctctgcgtgtgaccctcacacca
aagaagctcaaaacaggcatcggcagcaccgtcatcctctcttgtgccctcagcggctcc
cccgagtacgtcatccgctggtaccgcaacacggacctggtggcggtggatgattacatc
tccatccgcggcatcagcaacgagaccctcctcatcacggccgcccagaagagccactcc
ggggcctaccagtgcttcgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggggccccgccaccgaccgtcacctgg
gcgctggatgacgagcccatcccgcgggacagcgggcaccgctccaaccagtacaccatg
tctgatggcaccaccgtgagccacatgaacgtgaccgggcctcaaatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagagggcccccgagcatccgcgccatgaagaacattacagcggtcgcgggtagggac
actttcatcaactgcagggtcatcgggtacccctattactccatcaagtggtacaaggac
tctctgctgctgcccgataaccaccgccaagtggtctttgagaatggcaccctgaagctg
atggatgtccagaagggcatggatgaaggagaatatctgtgcagcgtgctgatccagccc
cagctctccatcagccagagcgtccacgtcaccgtcaaagtccctccactgatccagccc
ttcgagttcccaccagcctccatcggacagctcctctacatcccctgcgtggtctcctcc
ggggacatgcccatccacatcacctggaggaaggacgggcacgtcatcctctctggctct
ggggtcaccatcgagagcaaggagttcatgagctccctgcagatctccagcgtctccctc
aagcacaacgggaattacacctgcatcgccagcaacgacgctgccaccgtcagccgagag
cggcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagatggc
atttatggaaaagctggggtgctgaactgctctgttgatgggtaccctcccccgaaagtg
atgtggaagcacgctaaaggaagtggcaacccgcagcagtaccaccccatccccctgaca
ggccgcatccagattctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggcgtgggcacagacatcagcaagtccatg
ttcctcactgtcaagatcccagccatgatcacctcccaccccaacaccaccatcgccatc
aagggccagaccaaggagctgaactgcacggcacggggcgagcggcccatcatcatccgc
tgggagaagggggacaccgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaaacctgctgaccgcggggac
tccgtcttcttctcgtgtcacgccatcaactcctacggcgaggacaggggcttgatccag
ctcactgtccaagagccccctgacccgccagagctggagatccgtgaggtgaaagcccgg
agtatgaatttgcgatggacgcagaggttcgatggcaacagcattatcaccgggttcgat
atcgagtacaagaacaagtcagattcctgggattttaagcagtctacgcgcaacatctcc
ccgaccatcaaccaggcgaacatcgtggacctgcaccccgcctcggtgtacagcatccgc
atgtactccttcaacaagatcgggcgcagcgagcccagcaaggagctcaccatcagcacc
gaggaagcagctcctgacggccctccgatggatgtcaccttgcagccaatcacatcccag
agcatccaggtcacctggaaggccccaaagaaggagctgcagaacggggtgatccgtggc
taccagattggctaccgggagaacagcccgggcagcaatgggcagtacagcatcgtggag
atgaaggccacgggggacagtgaggtctacacgctggacaacctcaagaagtttgcgcag
tacggggtggtggtgcaggcattcaaccgtgcgggcacggggccctcatccagcgagatc
aacgccaccactctggaggatgttcccagccagccccccgagaacgtgcgagccatctcc
atcacgtcggatgtggccgtgatctcctggtcagagcctccgcgcagcaccctcaacggg
gtgctcaagggctaccgggtcatcttctggtccctctacatggacggagagtggggcgag
atgcagaacatcacgaccacgcgggagcgagtggagctgcggggcatggagaaattcacc
aactacagcgtgcaggtgctggcctacacccaggcgggggacggcgtccgcagcagcgtg
ctctacatccagaccaaggaggacattccaggtcccccagctgggatcaaggctgtacca
tcctctgccagcagcgtggtggtgtcctggctgccaccagccaagcccaatggcatcatt
cggaaatacaccatcttctgctccagccccggctcggggcagccggctcccagcgagtac
gagaccagcccggaccagctcttctaccgcatcgcccacctgaacagggggcagcagtac
ctgctctgggtggccgctgtcacctctgctggccgcggcaacatcagcgagaaggtcacc
atcgagcctgcgggcaaagcccccgccaagatcatctccttcggaggcaccgtcaccacg
ccgtggatgaaggacgtgcggctgccgtgcaactccgtgggggagccggtccctgccatc
aagtggaccaaggacagcgaggactctgccatcccggtgacagtggacgggcaccgcctg
atccaggccaacgggacgctggtgctgcgctcggtgaaagccgaggactccggctactac
acctgcactgccaccaacacctggggcttcgacaccatcatcatcaacctgctggtgcaa
gtgcccccggaccagccccgcctgactgtctccaagacctcagcatcatccatcacgctg
gcctggatccctggggacaatgggggcagctccatccgaggctttgtgctccagtactca
gtggacaacagcgaggagtggaaggacgtattcatcagctcctccgagcgctccttcaag
ctggagagcctcaagtgtggcacctggtacaaggtgaagctggcagccaagaacagcgtc
ggcgccggccgcatcagcgagatcatcgaggccaagacccacggcagagagccctccttc
agcaaggaccagcacctcttcacccacatcaactccacgcacgccaggctgaacctgcag
ggctggagcagcgggggctgccccatcaccgccatcgtcctggagtaccgacccaagggc
aactgggtgtggcagagcctgcgcaccaacagctccagcgaggtgttcctgaccgagctg
cgcgaggccacctggtacgagctgcgcatgaaggcctgcaacagcgccggctgcggcaac
gagaccacgcagttcgccacgctggactacgatggcagcaccatcccaccaatcaagtct
gcccaaggggaaggtgatgacgtgaagaagctcttcaccatcgcctgccccgtgatcctg
gccacgctgggagtggccctgctcttcatcatccgcaagaagaggaaggagaagcggctg
aagaggcttcgagatgcgaagagtttggctgaaatgttgatcagcaagaataaccgcagc
tttgacacgccggtgaaggggcccccacagggcccccgcctgcacatcgacatcccacgg
gtgcagctcctcattgaggacaaggagggcatcaagcagctgggggatgacaaagccacg
atcccggtgaccgacacggagttcagccaggcagtgaacccccagagcttctgcacaggc
gtgtctctgcatcacccagccctgatccagaacaccgggcccctcatcgacatgtccgac
atccgccctggcaccaaccccgtgtcaaggaagagcgtgaagtctgcgcacagcacccgc
aaccggtactccagccagtggacactcaccaagtgccaggcgtccacccctgccaggacc
ctcacctcggactggaggacagtgggctcccagcatggcatcacggtcaccgagagcgac
agctacagcgccagcctctcgcaggacacagacaaggggcggaacagcatggtgtccaca
gagagcgcctcgtccacctacgaggagctggcgcgtgcctacgagcacgccaagctggag
gagcagctgcagcacgccaagtttgagatcaccgagtgcttcatctccgacagctcctcg
gaccagatgaccacgggcaccacggacaacgccgacagcatgacctccatgagcaccccg
tcggagcccggcatctgccgcttcaccgcctccccacccaaaccccaggacagcgagcgg
ggcaagggtgtggccgtgcccatcccacaccgcgccagcaagagtgactactgcaacctc
ccgctgtacgtcaagtcggaggccttcttccgcaagcccgacgcccacgagccgtgcccg
gtggtgccgccgcgggaagcctccatccgcaacctggcccgggcgtaccacgcgcaggcc
cggcacatgacgctggagcccggcgccaaacccctggggctgcctcccccggcctccgcc
gcaaccaccttacctcagaggactctccccatgcccggcccggccggcccagcacccgcg
cccgccgccggcgccgccccggctccccccgtggccgccgagccccccgtggccgccgcc
gaggcgcgggtgcccacgcactccaaagtggggggttccagggactcactgctggagatg
agcacgtcgggggtaggcaggtctcaaaaacaaggtgccggagcctactccaagtcctac
acgctggtgtaa
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