Cinclus cinclus (white-throated dipper): 134053714
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Entry
134053714 CDS
T10813
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03082
ATP-dependent chromatin remodeling
ccic03083
Polycomb repressive complex
ccic04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134053714 (RBBP4)
03083 Polycomb repressive complex
134053714 (RBBP4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
134053714 (RBBP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134053714 (RBBP4)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
134053714 (RBBP4)
Histone modification proteins
HAT complexes
HATB complex
134053714 (RBBP4)
HDAC complexes
Sin3A-HDAC complex
134053714 (RBBP4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
134053714 (RBBP4)
PRC2.2
134053714 (RBBP4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
134053714 (RBBP4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
134053714 (RBBP4)
Chromatin remodeling factors
NuRD complex
134053714 (RBBP4)
NuRF complex
134053714 (RBBP4)
NuRF complex (fruit fly)
134053714 (RBBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
134053714
NCBI-ProteinID:
XP_062364851
LinkDB
All DBs
Position
26:5640938..5648670
Genome browser
AA seq
425 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaagcagcctttgatgatgcagtggaagaacgtgtgatcaacgaggaa
tataagatatggaaaaagaacacccccttcctgtatgatttggtgatgacccatgccctg
gagtggcccagcttgactgctcagtggcttcctgatgtcacaagacctgaaggcaaagat
ttcagcattcacaggttggtgctgggcacccacacctcagatgaacaaaaccacctggtg
attgccagtgtgcagctccccaatgatgatgcccagtttgatgcttcccactatgacagt
gagaaaggagagtttggaggctttggctcagtaagtggaaaaattgaaattgaaatcaag
ataaaccacgagggagaggtgaacagagctcggtacatgccccagaacccctgcatcatt
gccaccaagactccctccagtgatgtcctggtctttgattacaccaagcacccctccaaa
ccagatccttctggagagtgcaacccagacctgcgtctccgggggcaccagaaggagggg
tatgggctctcctggaacccaaacctcagtgggcatttgctgagtgcttctgatgatcat
accatttgcttgtgggatatcagtgctgttcccaaagaaggcaaagtggtggatgccaag
accatcttcacaggacacacagcagtggtggaagatgtatcctggcacctgctccatgaa
tccctgtttggatctgttgctgatgatcagaagctcatgatctgggacaccagatcaaac
aacacctccaaacccagtcattccgtggatgctcacacagctgaggtgaactgcctgtcc
ttcaacccctacagtgaatttatcctggccacaggatcagctgataagactgttgctcta
tgggacttgaggaacctaaaactaaagctgcactcctttgaatcacataaagatgaaata
tttcaggttcagtggtctccccataatgaaaccatccttgcctccagtggcacagaccgc
aggctaaatgtttgggacttgagtaaaattggagaggagcaatcccctgaagatgctgag
gatggtcccccagagctgttgttcatccatggtggtcatactgcaaagatctctgatttc
tcctggaatcctaatgagccctgggtcatttgttctgtatcagaagataatatcatgcaa
gtctggcaaatggcagagaacatctacaacgatgaagatcctgaaggaagtgtggatcca
gaaggtcaagggtcctag
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