Cinclus cinclus (white-throated dipper): 134053741
Help
Entry
134053741 CDS
T10813
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03013
Nucleocytoplasmic transport
ccic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134053741 (SRRM1)
03015 mRNA surveillance pathway
134053741 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134053741 (SRRM1)
03041 Spliceosome [BR:
ccic03041
]
134053741 (SRRM1)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134053741 (SRRM1)
Spliceosome [BR:
ccic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
134053741 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
FliX
Motif
Other DBs
NCBI-GeneID:
134053741
NCBI-ProteinID:
XP_062364892
LinkDB
All DBs
Position
26:6288785..6305834
Genome browser
AA seq
887 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPVPEKKEATPEPEPSVKPKETVVQEAASNS
DIPKAPKPEPPVPETKETSPERNSKKEREREKEKEKTRQRSPTRSKSRSRSRSRSPSHSR
PRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRPVSSPPRKTRRLSPSSSPPRRRHRPSPPGTPPAKPRRSPSPQQSN
RARKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRR
QYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRRRQKDSSPR
RRRRSPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYS
PSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAKRRSPSVSSKHRKGSP
PSRSNRETRSPPQNKRHSPSPRPRASHPSSSPPPPRRGASASPQRRQSPSPSSRPIRRVS
RTPEPKKTKASTPSPRRVSSSRSASGSPETAPKKHQGPASPARSRSPSANWSPAKKAKSP
TQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAAAVAAADTTS
AQGEQETETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgggttcttccgcggaaccagtgcagagcaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaagtttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagagctgtggccacttctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacaacgacagatagagcaggagaaa
ctggcttccatgaagaaacaagatgaagacaaagagaagagagataaggaagacaaagac
aacagagagaaaagagacagatcaaggagtccaagaagacgcaagtcccgctctccctcc
ccgcggcggcgctcgtcgcccgtgcgccgcgagcggaagcgcagccactcccgctcccct
caccaccgcaccaagagccgcagtgccacccctgtccccgagaagaaagaggccactcct
gagccagaaccctccgtgaaaccaaaggagactgttgtgcaagaggcagcttcaaacagt
gatatcccaaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagggagagggagaaggagaaggagaagactcgtcagaga
tccccaactcggtccaagtccaggtcaagatcccgatcccgttctccatctcattctcga
cccagaaggcgccatagatcacggtcaagaaggcgacccagcccgcggcgccggccgtcc
ccgcgcaggaggagcccgccccggagaatgcctcccccacccaggcacaggaggagcaga
tcccccgtgaggcggagaagacgctcctcggcctcgctgtccggcagcagctcctcctca
tcctcgtctcgttcccgctctccaccaaagaagcctcccaagagacccgtgtccagccct
ccccgcaagacacggcgcctgtccccctcctccagcccccccaggcgccgccaccggccc
tcgccccccggcacccccccggccaagccccgccgctcgccctccccccagcagtccaac
cgcgcccgcaagagccgcggctccgtctcaccgggcagggcttcagcacccaaacataag
agtactgagaaaagagaatctccttcgccagcacccaagcccaggaaagcggagttgtcg
gaatcagaagaagacaaaggaggcaaaatggctgcagcagattctgtccaacagaggcgc
cagtacaggaggcaaaatcaacagtcttcatctgattctggttcttcatcttcctcagaa
gaggagaggcccaagaggtcgaacgtgaagaacggggaggtgggcaggcgccgccggcac
tcgcactcccgcagcccctcgccctcgccccgccggcgccagaaggattcctcccctcgc
aggaggaggaggagcccctcgccgccccccgcgcgccggcgccgctccccttccccggca
ccgccgccccggcgccgccgctccccgtccccgcctcgccgaaggtctccatcaccacct
ccacgcagacgttctccctctccacggagatactcccccccgatccagaggcgatattcc
ccatctccccctcccaagaggagaacagcttctcctcctccccctcccaaaagaagggcc
tccccttcaccccagtccaagcgcagagtctcccactccccaccaccaaaacagaggagc
tcccctactgctaaacggcgctccccttccgtatcttccaagcacaggaaggggtctcct
cccagcagatccaacagggaaacacgttctccaccacaaaacaaaaggcattcaccttca
ccacggcctcgagcttcccacccctcctccagccccccgccaccgcgccggggagcgtcg
gcgtcgccgcagaggaggcagtcgccctcacccagcagccggcccatcaggagggtgtcc
agaacaccagaacccaagaaaacaaaggcttccacccccagcccccggcgcgtgtcctcg
tccagatctgcctcaggatcacctgagacagctcccaaaaaacaccaaggacctgcatct
cctgcccgctctcgctctccttctgccaactggtcacctgcaaaaaaggccaagagccca
actcagagcccatcacctgccaggaattcagatcaagaaggtggtggcaagaagaagaag
aaaaagaaggataagaagcataaaaaggataaaaagcacaagaaacacaaaaagcataag
aaggagaaggcagcagcagctgcagcagctgctgctgtggctgcagcagacaccacctca
gcacagggagagcaggaaacggagacagaacccaaaaaggagacagagagtgaacccgag
gacaacctggatgacctagaaaagcacctgagggagaaggccctgaggtccatgaggaag
gcgcaggtgtcccccccctcctag
DBGET
integrated database retrieval system
