KEGG   Cinclus cinclus (white-throated dipper): 134054002
Entry
134054002         CDS       T10813                                 
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03440  Homologous recombination
Brite
DNA replication proteins [BR:ccic03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    134054002 (TOPBP1)
DNA repair and recombination proteins [BR:ccic03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     134054002 (TOPBP1)
SSDB
Other DBs
NCBI-GeneID: 134054002
NCBI-ProteinID: XP_062365387
LinkDB
Position
1:complement(43429262..43452749)
AA seq 1516 aa
MRSSEEPFFVKFIKSSGSSQYFSKALESIKEFQSEEHLQILEEETVLSIKENDKSLYICD
PFRGVGFSHLKKLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMTMADVTVSCTSLEKDVR
EEIHKYVQMMGGCVYRDLNLSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKTLWDKSQQ
GIIRYTDVNMEDYACPVFLGCTICVTGLSSSDRKEVQRLTAEHGGQYTGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVSVQWFSDSIKKGFCQDEAMYKIEAGSKLSDAPSTSTPTND
TSKPPNHTLSDVSHISNINLSGVNETACSSAMSSRLDPLSDELENLDMSSFQAPEDLLDG
CRIYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHVIVGENNDELKHFLDETAHRPYI
VTAKWLLESFGKGCLCPVEHYIPLNYQLLENPILEQPGTKSIFPQKASLLKKDTVNIIKH
QKAAEDDFLSQYVNNYSTLVEKLTSRTFSDVTNSTAQGENLPSVCNGSLAESSALAEGAL
FFKKRFLLLGFSEEDESCIADIIKENAGEVLPPQSRTIADYAVVPLLGCTVKATVGDVVT
NTWLITCVEQQALLDLRSNPLFTPVLVMEGATPLEDCVLSFSQFTGAERDSLVYLAGLLG
ARVQEFFVRKASAKKGMFASTHLVVREPNGSKYEAAKKWNLPAVTVAWLLQSARMGKRAD
ESKFLVENAEAEESFITQLSKTPATVKSPDSEQPTPLLEVGKKGAVTPLDIKRFQSKAFQ
AVISHHTGKTTPVAQGGPLQKEPSLNLDTPSKFLSEDKLFKPSFDVKDALEALETPKGPE
QRTRKLSTPLSEVIGRNLKVALASSTMHTAALTASPQLAAAQPEVEEEPKPLADAVIYVS
KKLSKRQRELNAVAASLGADYRWCFDETVTHFIYKGGQNDNNKEYKSVKERGIHIVSEHW
LLESARECKRLPESLFPHTYNPKMSLDISAVQDIRLSSSSSKPVSIGKPAEENEIIPVHE
NGDEDDITTDEIKKTVNVGEEQIVASESKGVLTQALEMRENFQRQLQELMSATSLVKPQG
QRGSLSRGSFDGSPATPDSARSVRNGRSRVLEALRQSRQALADTNTEPSQSEQIIWDDPT
AREERARLVSNLQWPNSPSQYLEQGQSNTNKNVDESALTGSVPDAEMAGIAVPEAGDGDV
IESLKNPICRDPETPIKDNLIPTPQAPSIAFPLANPPVAPEPKEKIFTEDEKAHEETEKL
RKFQLSSLNPQERIDYCHLIEELGGIVLEKQYFDPSCTHIVVGHPLRNEKFLASMAAGKW
VLHRSYLEACRAAGCFVQEEDYEWGSNSVLNVLSGINVNQKKLALAAMRWRKKIHKGRQE
TGVVEGAFSGWKVILNVDQTKEAGFRRLLQSGGAKVFSGHSVSLFKEATHLFADFSKLKP
DDSRVNVAEAAAQGVNCLKPEYIADYLIQDPPPPMESYSLPEAESCLQNNSDLGTGLSQK
RKALGEMSRVKRSRIH
NT seq 4551 nt   +upstreamnt  +downstreamnt
atgagaagtagcgaggagccgttttttgtgaagttcataaagtcttctgggagttcgcag
tatttttctaaagctcttgagtctataaaagaattccagtcagaagaacatctccagatc
cttgaagaagaaacagtactcagtataaaagaaaatgataaatcactttacatttgtgac
cctttccgaggtgtgggtttcagtcatctcaaaaagcttggctgtaggattgttggacca
caggtagttctgtactgcatgcagtcgcagcggtgtgtccccagagccgagtatcccgtg
tacaacatgaccatggctgatgtcacggtgtcctgtaccagcctggagaaggacgtgagg
gaagaaattcataaatatgtgcaaatgatgggtggatgtgtatacagagacctcaacttg
tccgtaactcatcttatagctggggaagttggcagcaagaaatatttggtagctgcatcc
ctgaagaaacctattttacttccgtcttgggttaagacattgtgggacaagtctcagcaa
ggcataataaggtacactgatgttaacatggaagactacgcttgtcctgtgttccttggc
tgcacaatttgtgtcactggcttaagcagctctgacaggaaagaagtgcagcgtctcact
gctgagcacggtgggcagtacacggggcagctcaagatgaatgagtgtactcacctcata
gttcaagagccaaaaggtcagaaatatgaatgtgccaaaaagtggaatgtgcactgtgta
tctgtgcagtggttttctgacagcatcaagaaaggcttctgtcaggatgaggcaatgtat
aaaatagaggctggatcaaaactgagtgatgcacccagtacatcaacacctacaaatgac
accagcaagcctcctaatcatactctttcggatgtcagccacatttccaatatcaatttg
agtggtgttaatgaaactgcatgtagttcagctatgagcagcagactggaccctctttct
gatgagctggaaaacttggacatgagttcttttcaagcccctgaagatttgttagatggg
tgtcgaatctatctctgtggcttcagtggcaggaagttggacaagatgagaaggcttatt
aattgtggtggtggcgttcgatttaatcaacttaatgaagatgttactcatgtcattgtg
ggggaaaataatgatgagctgaaacactttttggatgagacagctcacaggccttatata
gtgacagcaaagtggttgctggagtcatttggtaagggttgtctatgtccagtggagcac
tatatccctctaaactaccaactgttggagaatccaattttagaacaacctggaacaaag
tcaatttttccccaaaaagccagtctcttgaagaaagacactgtgaacattataaagcac
cagaaagctgctgaagatgacttcctctctcaatatgtaaataactattctacactagtg
gaaaaactaacatccagaactttcagtgatgttactaactcgaccgcccaaggagagaat
ctaccttctgtctgtaatgggtctttggcagagtcgtctgcactggctgaaggagcctta
tttttcaagaagagatttcttcttctgggttttagtgaagaggatgagtcctgcattgca
gacattataaaggagaatgctggggaagttctgccaccacaaagcagaaccattgcagac
tatgctgtggtacctttattagggtgcactgtgaaggcaactgtcggtgatgtcgtcaca
aatacatggctgatcacatgtgtggaacagcaggcccttttagatctccgatccaatcca
cttttcaccccagtcctggtaatggaaggagctacccctctggaagattgtgttctttct
tttagccagttcactggtgcagagagagattcccttgtttatctggcaggactgctggga
gccagagtccaagaattctttgtgcggaaagccagtgccaaaaagggaatgtttgccagc
acccatcttgtagtgagagaaccaaacggctccaagtatgaagctgcaaagaaatggaat
ttgccagcagtcactgtggcttggcttttgcagtctgcgaggatgggaaagagagcagat
gaaagcaagttcttggttgaaaatgcagaggctgaagagagtttcattactcagcttagc
aagacaccagcaactgttaaatctcctgattcggagcagcctactcctcttcttgaagtt
gggaaaaaaggagctgtgaccccccttgatatcaaaaggttccagagtaaagctttccaa
gctgtcatctctcatcatactgggaagacaactcctgttgcacaagggggaccactccag
aaagaaccatctttaaatcttgacacaccatcaaagtttctttctgaagacaagttgttc
aagccttcttttgatgtaaaggatgctctggaagctctggaaactcctaaaggtcctgag
caaagaaccaggaaactgagcacacctctctctgaagttatcggcagaaacttgaaagtg
gcactggcaagcagcacaatgcatacagcagctcttactgccagccctcagttggctgct
gcacagccagaagtggaagaagagcccaagcctctagctgatgctgttatatatgttagt
aaaaaacttagtaagaggcaaagggagctgaatgcagtagcagcttctcttggagcagac
tacagatggtgctttgatgaaacagtaacacacttcatctacaagggaggacagaatgat
aacaataaggagtacaaatctgttaaagaacggggtatacatattgtttcagaacattgg
cttttagagagtgcccgagaatgtaaacggcttcctgaatctctctttcctcacacttac
aatcccaaaatgagcttggatatcagtgcagtgcaagacatcaggctctcatcctcttcc
agtaaacctgtttcaatcggaaaaccagcagaagaaaatgagattattccagtgcatgaa
aatggtgacgaagatgacattactactgatgaaataaagaaaacagtcaatgtaggggaa
gaacaaattgtagcaagtgaatccaaaggagttttaacccaagcactagaaatgagggag
aacttccaaaggcagctacaggagctcatgtctgccacgtcactagtgaaaccacaaggg
caaagaggatccctttccaggggcagttttgatggttctccagccactcctgatagtgca
cggtctgtgcgcaatggccgcagtagggtcttggaagctctaaggcagtcccgccaggca
ctggcagatacaaacacagagccatcccagagtgagcagataatttgggatgatcctact
gcaagggaagagagagcaagacttgtcagcaaccttcagtggcctaatagtccttctcag
taccttgagcaaggtcagagtaacaccaataagaatgtggatgagtctgccctcacagga
tctgtacctgatgcagagatggctggtatagctgttcctgaggctggggatggagatgtg
attgaaagtttaaagaatcccatatgtagagatcctgaaacaccaattaaggataacttg
atccctactccacaggcccccagcattgctttccccctggctaaccctcctgtggcacca
gagcccaaagaaaagatttttactgaagatgagaaggctcatgaagaaacagaaaaactc
cgtaaatttcagctgtcctctcttaatcctcaagaaagaattgattactgccatctgatt
gaggaattaggtggaatagtacttgagaaacagtactttgatccaagttgcacacacatt
gttgtgggacatcctcttcggaatgaaaaattcttggcttcaatggctgctggaaagtgg
gtgcttcatcgttcctacctggaggcgtgtagagcagctggctgctttgttcaggaagaa
gactatgagtggggaagtaactctgtacttaatgttttgtctggaatcaatgtaaaccag
aagaaactagcactggcagccatgaggtggaggaaaaaaattcacaaagggaggcaagaa
acaggtgttgttgagggagctttcagtggttggaaggtgatcctgaatgttgatcaaacc
aaggaagcaggattcaggcgccttcttcagtcaggaggagcaaaagtgttttctggccat
tctgtgtctctctttaaagaagcaactcacctctttgctgacttcagtaagctgaagcca
gatgactccagggttaacgtggcagaggcagcagcccagggagtgaactgcctcaaacct
gagtacatcgctgactacctcatccaggatccacctccccctatggagtcttacagccta
ccagaagctgagtcctgccttcagaataactcggatcttggaactggattatcccagaaa
agaaaagcactgggagaaatgagccgagtcaagcgatccagaatacactaa

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