Cinclus cinclus (white-throated dipper): 134054056
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Entry
134054056 CDS
T10813
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134054056
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134054056
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134054056
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-C3HC4
zf-CCCH_2
zf-RING_2
zf-RING_UBOX
zf-CCCH_PARP12
zf-RING_5
zf-C3HC4_4
zf-rbx1
IBR_1
Motif
Other DBs
NCBI-GeneID:
134054056
NCBI-ProteinID:
XP_062365480
LinkDB
All DBs
Position
27:4469064..4471974
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AA seq
390 aa
AA seq
DB search
MASGPSGTEAGCLRPVCRNFARGSCRWGHSCHFSHDRKSAQVCRYFQSGFCRYGEQCSYQ
HIQEEPAAVGTQYGVMPRCPCSQEPAAEPTAMDWDQGGAHCTSVHPAHSMTCVAFKFPKV
KVEVEEKDKKNIPALGNVHCGAVSGEFVPTKARGASDFQPQGPALDADSSHPREAVLETA
TWTDPSKVPAERGAVAALVTTAALRAQSEAIVCGICMDRVYEKPLPEERLFGILPNCSHA
YCVGCIRKWRRSRDFQSTVIKACPECRITSSYYIPHKYWISDVGEKEKLIRTFKARTGKI
RCKFFIRGHCPFRSECIYLHELPARRLWRHRRQQLRMPVVFIPSSSESSDEEDEEFCTLE
WALTLAMLETEFPYLSYGHEMFLTDFSDSD
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgggccgtcaggaaccgaggcaggctgtctgagacccgtgtgcaggaatttt
gcccgtggatcctgtcggtggggccacagctgccacttctcacatgacagaaaatcagcc
caggtctgcaggtacttccagagtgggttttgccgttatggagagcagtgcagctaccag
cacatccaggaagagccagcagcagtagggacccaatatggtgtgatgccccgctgcccc
tgcagccaggagcctgctgctgagcccacagccatggactgggaccaggggggagcccat
tgcacctcggtccaccctgcccacagcatgacgtgtgtggccttcaagttccccaaagtg
aaggtagaagtggaagagaaagacaagaagaacatcccagcacttggtaacgtccactgt
ggggctgtcagtggagaatttgtccccacaaaagctcgaggtgcctcagacttccaacca
caagggccagcactggatgcagactcctctcaccccagagaggcagttttggagacagca
acatggactgacccttctaaggtccctgcagagcgaggtgctgtggcagccctggtcacc
actgcagcactaagagcccagagtgaggccatagtgtgtggcatctgcatggacagggtg
tacgagaagcccctgccagaggagcggctcttcgggatcctcccaaactgcagccacgcg
tactgtgttgggtgcatccgcaagtggcggcgcagccgggacttccagagcactgtcata
aaggcctgcccagagtgccggatcacctccagttactacatcccccacaaatactggatc
tcagatgtgggggagaaggagaagctcatcagaaccttcaaggcacggacagggaaaatc
aggtgcaaattcttcatccgtggccactgccctttcagatcagagtgcatctacctgcat
gagctgcctgcccgccggctgtggcggcacagacggcagcagctgagaatgcccgtggtg
ttcatcccttcttcctcggagagctctgacgaggaggatgaggaattctgcacgctcgag
tgggctcttaccctggccatgctggagacagaatttccctacttaagttatggccacgag
atgtttctcactgacttcagcgattccgactga
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