Cinclus cinclus (white-throated dipper): 134054166
Help
Entry
134054166 CDS
T10813
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134054166 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134054166 (NFASC)
Cell adhesion molecules [BR:
ccic04515
]
Immunoglobulin superfamily
L1 family
134054166 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_VEGFR-1-like_5th
TMEM154
BiPBP_C
PFF1_TM
RIFIN
Motif
Other DBs
NCBI-GeneID:
134054166
NCBI-ProteinID:
XP_062365655
LinkDB
All DBs
Position
27:complement(2896923..2950609)
Genome browser
AA seq
1283 aa
AA seq
DB search
MIPRRAQISCAGIAFALCLQHLVSAIEVPLDSVIQSELPQPPTITKQSIKDYIVDPRDNI
FIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQCF
ARNDFGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSSS
MEPIPQDKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKSH
NETSLGNSPAMYRARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGDLPVDKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTILVRVKAAPYWLDQ
PENLILAPGEDGRLVCRANGNPKPSIQWLVNGEPIESSPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIRVIQNNRTRLDCPFFGSPIPTL
RWFKNGQGNTLDGGNYKAHENGSLEMFMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGTMPRLHCRVKHDPTLRLMVTWLKDDAPLYLGNRMKKEEDGLTIYGV
TEKDQGDYTCVASTELDKDAAKAYLTVLAVPANRLRDLPKERPDRPRDLELTDLAERSVR
LTWIPGDDNNSPITDYIVQFEEDRIQPGVWHNHSRYPGSVNSAVLSLSPYVNYQFRVIAV
NDVGSSVPSLPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVRSARHVVWNTPIYVPYEIKVQAENDFGRAPEPDTYIGYSGEDYP
KAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVS
FPGDRNRGTVSRLFPYSNYKLEMVVTNGRGDGPRSETKEFPTPEGVPSSPRYLRIRQPNL
EIINLEWDHPEHPNGIITGYTLRYQPFNGSQMGRTVVEHLSPNQTRFTLQRSDPISRYRF
VLRARTQVGEGEALVESSPALLDEATPSPGTATGPPPTAVEETSPETSPETSPTTSPTIS
PTTSPTISPTTSPTTTDTTTTTTTTTTTTTTTSSTAASTSAAAERAPAATTRHELAYTKN
QVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVRDNKDEHLNPEDKNVEDGSF
DYRSLESDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKD
KEETEGNESSEATSPVNAIYSLA
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaggagagcccagatctcctgtgccggaattgcctttgccctctgcctccag
cacctcgtcagtgccatcgaggtgcccctggactcagttatccagagtgaattgccgcag
ccccccacaatcaccaagcaatccatcaaggattacattgtggatcccagggataacatc
ttcatcgaatgcgaagccaaaggcaatcccgttcccaccttttcctggacacggaatggg
aagttcttcaatgtggccaaggatcccaaggtgtccatgaggaggagatcggggactttg
gtcattgacttccacagcgggggccggcccgatgactacgagggcgagtaccagtgcttt
gcgaggaatgacttcggaacggccctttccagcaaaatccacctccaggtttccaagtct
ccgctgtggcccaaggagaaggtggatgtgatcgaggtggatgagggggccccgctgagc
ctgcagtgcaatcccccacccggcctccccgagcccgtcatcttctggatgagcagctcc
atggagccaatcccgcaggacaagcgcgtgtcccagggtcacaacggggacctttatttc
tccaacgtgctggctcaggacgctctgaccgactacagctgcaacgcccgcttccacttc
acccacaccatccagcagaagaacccctacaccctcaaggtcaaaaccaagaagtcccat
aacgaaacgtctttaggaaattcccctgccatgtaccgcgcccgagggatcacagaaacc
actcccagcttcatgtatccctacggaacttccagcagccagatggtgctccgaggggtg
gatctcctgctggaatgcatcgcctccggagtaccagcaccggacatcatgtggtacaaa
aaaggcggagacctcccggttgacaaaaccaagctggagaatttcaacaaggccctgcgc
atctctaacgtgtccgaggaggattccggggaatatttctgcctggcctccaacaagatg
ggcagcatccgccacacgatcttggtgagagtgaaggctgctccctactggctggatcag
ccggagaacctgatcctggcccccggcgaggacggcaggctcgtgtgccgggccaacggg
aaccccaaaccatccatccagtggctggtgaacggagagcccatcgaatcgtctcccccc
aacccgagccgggaggtggccggggacaccatcgtgttccgggacacgcagattggcagc
agtgccgtgtaccagtgcaacgcgtccaacgagcacggctacctgctggccaacgccttc
gtcagtgtgctggatgttcccccccggatcctggctccccggaaccagctgatcagggtg
atccagaacaacaggacccgcctggattgtcccttttttgggtcccccatccccaccctg
cgctggtttaagaacggccaggggaacacgctggatggaggcaactacaaagcccacgag
aacgggagcttggagatgttcatggctcggaaggaggaccaggggatctacacctgcgtg
gccaccaacatcctggggaaagctgaggcccaggtccgcctggaggtcaaagaccccacc
aggatcgtgaggggccccgaggaccaggtggtcaagaggggcaccatgcccaggctccac
tgccgcgtcaagcacgaccccactctccggctcatggtcacctggctcaaggatgatgcc
cccctgtacctggggaacaggatgaagaaggaagaggatggtctgacgatctatggtgtg
actgagaaggaccagggcgattacacgtgcgtggccagcacggagctggacaaggacgcg
gccaaggcctatctcactgtgttggccgtccccgctaatcggttgagagatttacccaaa
gaacgacctgaccggccccgggacttggagctgacagacctggccgagaggagcgtgagg
ctgacgtggatccctggcgatgacaacaacagccccatcacagactacattgtccagttt
gaggaggaccgcatccagccaggagtgtggcacaaccactccaggtatcccgggagcgtc
aactcggccgtgctgagcctctcgccgtacgtgaattaccaattccgagtcatcgccgtc
aacgacgtgggcagcagcgtgcccagcctgccctccgagcgctaccagaccaacggggca
cgtcctgaaataaatcccacgggagttcaaggggcggggacccaaaaaaacaacatggag
ataacgtggacacctctgaatgcaactcaggcttatgggcccaacctcaggtacatcgtg
aggtggcggcggcgggacccccgcgggagctggtacaacgagaccgtgcggagcgcgcgg
cacgtggtgtggaacacgcccatctacgtcccctacgagatcaaggtgcaggccgagaac
gacttcggcagagccccggagcccgacacctacatcggatattccggggaggattatccc
aaggctgcgcccacggatgtcaggatcagagtcttaaacagcacagccatagctctgacc
tggacccgggtgcacctggacaccatccagggacagctcaaggagtaccgagcctatttc
tggagagacagcagcttgctgaagaacctgtgggtctccaaaaaacggcagtttgtgagt
tttcctggagaccgcaaccggggcaccgtgtcccggctgttcccttacagcaactacaag
ctggagatggtggtgaccaatggccgtggggacgggccccgcagcgaaacgaaggaattc
cccacccctgaaggagtgcccagctcccccaggtacctgcggatccgacagcccaacctg
gaaatcatcaacctggagtgggatcaccccgagcatcccaatgggatcatcacgggatac
accctccgataccagccctttaacgggtcccagatgggccggacggtggtggagcatctg
tcccccaaccagacgaggttcaccctgcagaggtcagaccccatctcccgctatcgcttc
gtgctccgcgcccgcacccaggtgggagagggagaggccctggtggagtcatcaccggca
ctgctggatgaagccacgccaagcccaggtaccgcaactgggccacctccaactgcagtg
gaggaaaccagtcctgaaaccagtcctgaaaccagtcctacaaccagtcctacaatcagt
cctacaaccagtcctacaatcagtcctacaaccagtcctacaaccaccgacaccacaacc
accaccacaaccaccaccacaaccacaaccaccaccagcagcactgccgccagcaccagc
gccgctgccgagagggctccagcagccaccaccaggcatgagttggcctacaccaagaac
caggtggacatcgccacgcagggctggttcatcggcctcatgtgcgccatcgccctcctc
gtgctcatcctcctcatcgtctgcttcatcaagaggagccgcggcgggaagtatccggtg
cgggacaacaaggacgagcacctcaatcccgaggacaagaacgtggaggatggatccttc
gactacaggtctcttgaaagcgatgaagacaacaaacctcttcccaacagccagacctcg
ctggatgggacgataaagcagcaggagagcgacgacagcttggtggactacggagaaggg
ggagagggccagttcaacgaggacggctccttcatcggccagtacacggtcaagaaggac
aaagaggagaccgagggcaatgagagctccgaggccacgtcccccgtcaatgccatttat
tccttggcatag
DBGET
integrated database retrieval system
