Cinclus cinclus (white-throated dipper): 134054279
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Entry
134054279 CDS
T10813
Symbol
RNF126
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134054279 (RNF126)
04121 Ubiquitin system [BR:
ccic04121
]
134054279 (RNF126)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134054279 (RNF126)
Membrane trafficking [BR:
ccic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
134054279 (RNF126)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134054279 (RNF126)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-Nse
zf-RING-like
C1_2
zf-RING_16
DUF7560
HypA
DUF3678
Motif
Other DBs
NCBI-GeneID:
134054279
NCBI-ProteinID:
XP_062365894
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All DBs
Position
28:complement(3872000..3879774)
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AA seq
313 aa
AA seq
DB search
MAEASPQPGRFFCHCCSAEIAPRLPDYICPRCESGFIEELPEEPRNADNETSSSTSATDQ
NRHPFENVDQHLFTLPQGYGQFAFGFFDDSFEFPFGSNVQQEDNRDSENRREREHQSRHR
YGARQPRARLATRRASGRHEGVPTLEGIIQQLVNGIIAPTTIPNLGLGPWGVLHSNPMDY
AWGANGLDAIITQLLNQFENTGPPPADKEKIQALPTIQITQEHVDSGLECPVCKEDYTVG
ESVRQLPCNHLFHDGCIVPWLEQHDTCPVCRKSLSGQNTATNPPGLTGMNFSSSSSSSSS
SSSPSNENSSNNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgtcgccgcagccgggccggttcttctgtcactgctgctcggccgagatc
gccccgcgcctgcccgactacatctgcccacggtgtgagtctggttttattgaagagctt
cctgaggagccaaggaatgctgacaacgagaccagctcctctacgtcagccactgatcag
aacaggcatccttttgagaacgtagatcagcacttgttcaccttgccccagggttatggc
cagtttgctttcgggttctttgacgacagctttgagtttcccttcgggtccaacgtgcag
caggaagacaaccgggactcggagaaccggcgggagcgtgagcaccagtcccggcaccgc
tacggtgccaggcagccccgcgcccgcctggccacgcgccgagcctcgggcaggcacgag
ggtgtccccacgctggaaggaattatccagcagctggtgaatggaattattgcaccaacc
acaattccaaacctaggcctgggcccttggggagtcctgcactcaaatccgatggactac
gcctggggtgccaatggcctggatgcgattattacacagttactgaatcagtttgaaaac
actggaccgccgccagcggacaaagagaagatccaggccctccccaccatacaaatcacg
caggagcacgtagattccgggttggagtgccctgtgtgtaaggaagattacacagtcggg
gagagtgtgcggcagttaccgtgcaatcacctgttccatgacggctgcatcgtcccgtgg
ctggagcagcatgacacgtgtcccgtctgccggaaaagtttaagtggacaaaacactgcc
acaaaccccccaggactcacagggatgaacttctcgtcatcctcctcctcctcctcttcc
tccagctcaccaagtaatgaaaactcatcgaacaactcatga
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