| Entry |
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| Symbol |
REXO1
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| Name |
(RefSeq) RNA exonuclease 1 homolog
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| KO |
| K14570 | RNA exonuclease [EC:3.1.-.-] |
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| Organism |
ccic Cinclus cinclus (white-throated dipper)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:ccic00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134054314 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:ccic03009]
134054314 (REXO1)
Ribosome biogenesis [BR:ccic03009]
Eukaryotic type
Pre-60S particles
RNases
134054314 (REXO1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
28:complement(2177096..2220715)
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| AA seq |
1229 aa
MLRSTGYFRGIDCPFLNAGGSGPGRGCRRPYCHFRHPPVAPAPCGASRASGDPSVGLPLG
HGAERGYDPYNPELPRPLLEAEDGTLADITDVTPGILELELVNKAIEAVKNEVEREQKKY
EELLETTKEFGASEGSSLISSTPVSAAGPQNDSFASLEYNPGSYNFNNNSDYNPTPLATA
GRSSKYTLDSSHSKGSSLEYVPKAVVQNKKYSSTVTNNKYVIDDSKPSTDLEYDPLSNYS
ARLLGKATTKGSKRERASDFEDSYSPSQKKLCEDPDDDEVLAKFSSSEDEAEVEYKTASG
SSPSKAGSESESNHEFSSKEKRTKVDGSTSQESGEAAQNREDLPNSQKNLAKNSPDKNSK
AAKLSSGKSNKEIENKNKDSKDKTKRKKTDVSKTPGLSEAGKKEKNKNADKVLKKEENLK
TKNEEKNCKEKSVKVKTDGNLKKPEKQKSEKVDGCKKEKSKSTTSSSGKSKSEGITKGTE
KVRNSKKDSQSKTADVKNGKESSGRKNKEKGTKTSREQRKNKVSSTGQGDLKKGRKQRSL
SHVDLFGDESGDDDDRGRPLSSSLLEVSSDSDGADSGSTSESDKDRTKKAKRSKLSKSSS
SSSTSDDIDYSILEKDVDFESDPMEECLRIFNESKDVKTEDKGRLGKQPSKEEANEEKTE
DNLTTLFPGQKRRISHLVKQGNAEAPSKPAVRPYRPPTAQEVCYQRIQLAQQQAAQLVGA
VQKTSLCLPGEKRRIAHVPNAALTAAAKQSLGSSKATVGGRSVTPSNDSEAPTLPLKPCT
LAGMASKTTSTIVPKRVAHVPSLQSTTLQRPVIPTEFGAKVPTNIRQRYLNLFIDECLKF
CSSSQEAFDKALAEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPASTNKTSNKKVVS
HEAVLGGKLAAKTSFTLNRSGSLRAEDLTGAALYRRLKEYLLTEEQLKENGYPMPHPEKA
GRAVLFTAEEKKVIDSSCRICCRCGTEYMVSASGNCIRKEECVHHWGRLRKQRVPGGWET
HYSCCSGAVGSPGCQVAKQHVHDGRKESLDGFVKTFEKLPTTDGYPGIYALDCEMCYTKQ
GLELTRVTVINSELKVVYDTFVKPDSKVVDYNTRFSGVTEEDLENTSITLRDVQAVLLNM
FSADTILIGHSLESDLFALKLIHGTVVDTAIVFPHRLGLPYKRALRTLMADYLKRIIQDN
VEGHDSSEDARACMELMVWKIKEDAKVKR |
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| NT seq |
3690 nt +upstreamnt +downstreamnt
atgctcagatccaccggctacttccgcggcatcgactgcccgttcctcaacgccgggggg
tcggggccgggccgggggtgccgcaggccctactgccacttccggcaccccccggtggcc
ccggcgccgtgcggagcctccagagcctcgggcgaccccagcgtggggctcccgctcgga
cacggcgcagagagaggctatgacccctacaaccccgagcttcccaggcccttgctggag
gcagaggatggcactctggctgacattacagatgtcacacctggaattctggagctggag
ctggtcaacaaagccattgaggctgtgaagaatgaagtggagagggagcagaagaagtat
gaggagctgctggaaaccacaaaggagtttggtgcttcagagggctcctcactcatttca
agcacacctgtgtcagctgctgggcctcagaatgattcctttgcctccttggagtataat
ccagggagctacaacttcaataataactcggactacaaccctactcctctggctactgct
ggcaggtccagtaaatacactttggattcctcccactccaaagggagctcactggaatat
gtccccaaggctgtagtgcagaataaaaaatacagcagcactgtcactaacaataaatat
gtgattgatgactccaaaccttccacagacttggaatacgaccccctttccaattactct
gccaggctcttgggcaaagccacaaccaaggggtccaaaagggaaagggcatctgatttt
gaggactcttattctccatcacagaagaagctctgcgaagatcctgatgatgatgaggtg
ttggccaagttctcctcctctgaagatgaggctgaggtggaatataaaacagcttctggt
agttcaccctcaaaagctggttctgagagtgagtcaaaccatgagttctccagcaaagag
aagagaacaaaagtggatggctctacttcccaggagagtggagaagcagcacagaacagg
gaggaccttccaaattcacagaaaaaccttgccaagaactcaccagacaagaactcaaaa
gcagcaaagttgtcttctggtaagagcaacaaggaaattgaaaataaaaacaaagactcc
aaagacaaaacaaaaaggaagaaaacagatgttagtaaaacaccaggcctcagtgaggct
gggaagaaggagaaaaataaaaatgcagacaaagtgctcaagaaagaagaaaatttaaaa
accaagaatgaagagaaaaactgcaaagaaaaaagtgtcaaagtgaaaacagatggaaac
ttgaagaaacctgaaaaacagaagtcagaaaaagtggatgggtgtaagaaagaaaaatcc
aagtccaccaccagcagttcagggaaaagcaagagtgagggtatcaccaagggcacagag
aaagtgaggaacagcaagaaggactcacaaagcaaaacagctgatgtgaaaaacggcaag
gaaagctctggccgtaaaaacaaggagaaagggaccaagacctcccgggagcaaaggaaa
aacaaggttagttctacaggacaaggagacctgaagaagggtcggaagcagcggagtttg
agtcacgtggacctgtttggagatgagagtggagatgatgatgacagaggtcggcctttg
tcctcctccttacttgaagtgagctctgactctgatggggctgactctggctcaacctct
gagagtgacaaggacaggacaaagaaagcgaagcgctccaagttgtccaagtcatcatca
tcttcctcaacatctgatgacattgattattccatccttgagaaagatgtggacttcgag
tcagatcccatggaggagtgtctcaggatctttaatgaatctaaagatgtgaaaactgaa
gacaagggaaggctggggaagcagccatccaaagaggaagcaaatgaagaaaaaacagaa
gataatttaactaccttgtttcctgggcaaaaaagaaggatctctcatcttgtcaaacaa
ggaaatgcagaggccccgagcaagccggcagtgcggccgtaccgtccccccacggcccag
gaggtgtgttaccagaggatccagctggctcagcagcaggcagcacagctggttggggct
gttcaaaagacctctctctgtttgccaggagaaaagaggaggattgctcacgtgccaaat
gcagccctcaccgcagcagccaagcaaagcctcgggagcagtaaggcgactgttggtggc
aggagtgtcacaccttccaatgactctgaagcccccacccttcctctgaagccttgcacc
ttggctgggatggcttccaagaccaccagcaccatcgtgcccaaaagggtagcacatgtt
ccctccttacagagcaccactttacagaggcctgttattcccacagaatttggtgctaaa
gtcccaaccaacattcgtcagaggtatctcaatctcttcattgatgagtgcctgaaattc
tgttcctcctctcaggaagcctttgacaaggccctggcagaggagaaggtggcctatgag
cgcagcaccagtcgcaacatctacctgaatgtggccgtgaacaccctgaagaagctgcgc
agcctcgtgcccaactccccagccagcaccaacaagacaagtaacaagaaggtggtgtcc
cacgaagctgtgctgggaggaaagcttgctgctaagaccagctttactctgaaccgctca
gggagcctgagagccgaggatctgacaggagctgccctgtaccggcgcctcaaggagtac
ctgctgaccgaggagcagctcaaggagaacgggtacccaatgcctcaccccgagaaggct
ggacgtgctgtgctcttcactgcagaggagaagaaagtgattgactcctcgtgcaggatc
tgctgtcgctgtggcaccgagtacatggtctcagcctcggggaactgcatccggaaagag
gagtgtgtccatcactgggggcggctgcgcaagcagagagtgccaggtgggtgggaaact
cactacagctgctgctccggagctgtggggtcaccaggctgccaggttgctaaacaacac
gtgcacgatgggcgcaaggagagcttggatggttttgtgaagacttttgagaagctgccc
acgactgatggctaccctgggatctatgccttagactgtgaaatgtgctacactaagcaa
ggactggagctgacaagagtaactgtgatcaactccgagctgaaagtggtgtacgacacg
tttgtcaagccagactccaaggtggtggattacaacaccagattctcaggtgtgacagaa
gaggacctggagaacacgagcatcaccctgcgggatgtccaagccgtcctactgaacatg
ttcagtgcagacaccatattgattgggcacagcttggagagcgacttatttgcactaaag
ctgatccacggcacagtagtggacacagccatcgtgttcccccaccgcctggggctgccc
tacaagcgcgccctgcgcacgctcatggctgactacctcaaacgcatcatccaggacaat
gtggaaggacacgactctagtgaggacgccagagcctgcatggagctgatggtgtggaag
atcaaggaggatgcaaaagtgaagcgatga |
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