Cinclus cinclus (white-throated dipper): 134054397
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Entry
134054397 CDS
T10813
Symbol
LINGO3
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134054397 (LINGO3)
Membrane trafficking [BR:
ccic04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134054397 (LINGO3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
Ig_2
LRRNT
V-set
LRR_RPS2
LRRCT
Ig_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
134054397
NCBI-ProteinID:
XP_062366118
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Position
28:complement(2623131..2624945)
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AA seq
604 aa
AA seq
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MPHTMTWWLPVLALHVVLLSPQTGACPARCECAPQLRSVLCHRKRLTAIPEGIPTETRVL
ELNKNRIRCLNPGDLSPYPLLEELDFSENIISNVEPGAFSNLFNLQTLRLRGNQLKLIPP
GVFTKLTNLTLLDISENKLVILLDYMFQDLHNLKSLEVGDNDLVYISQRAFSGLLGLEQL
TIEKCNLTSISAESLSYLQNLEVLRLRHLSISALEDQNFKKLYNLLQLEIDNWPLLEEVS
PTSFQGLNLTSLSITYTNITAVPAAALRNLVYLRYLNLSYNPISTVLRGSFKDLIRLQEL
HIVGALLVSVEPQAFSGLRQIRLLNLSSNFLSTLEESTFHSVNTLETLRVDRNPLACDCR
LLWILQRRKTLNFDGQQPMCSSPPEIQGNALRDFPDSVLFEYFTCQKPKIRDRKLQHVTA
REGQSVSFLCRADGEPDPSIAWVSPQHRMITTRSTGRATVLPGGTLEIRFAQVQDSGTYI
CIASNAGGNDTYFATLTVKGRPADGAHHANRTLYLSDFNDTFHNDTQVFLKFTLDLKTIL
VSTAMGCITFLGVVLFCFLLLFVWSRGRGQHKNNFSVEYSFRKVDGPTTTTGQGGARKFN
MKMI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccccacacaatgacatggtggctcccggtgctggccctgcacgtggtcctgctgtcc
ccgcagacgggtgcctgccccgcgcgctgcgagtgcgccccgcagctgcgctcggtgctg
tgccaccgcaagcgcctcaccgccatccccgagggcatccccaccgagaccagggtcctg
gagctcaacaagaaccgcatccgctgcctcaaccccggggacctgtccccgtacccgctg
ctggaggagctggatttcagcgagaacatcatctccaatgtggagcccggtgctttcagc
aacctgttcaacctgcagaccctgcggctgcgggggaaccagctcaagctcattcccccg
ggggtcttcaccaagctgaccaacctgaccctgctggacatcagcgaaaacaagctcgtc
atcctgctggactacatgttccaggatctgcacaacctgaagagcctggaggtgggtgac
aacgacctggtgtacatctcccagcgtgccttctcggggctgctgggcctggagcagctg
accattgagaagtgcaacctgacctccatctcggccgagtcgctgtcctacctgcagaac
ctggaggtgctgcggctccggcacctcagcatctctgcgctggaggaccagaacttcaag
aagctctacaatctcctgcagctggagatcgacaactggccactgctggaggaggtgtcc
cccaccagcttccagggcctgaacctcacctcgctgtccatcacctacaccaacatcaca
gccgtgcccgccgctgccttgaggaacttggtgtacctgcggtacctcaacctgtcctac
aaccccattagcactgtgctgaggggttcctttaaagacctcatccggctccaggagctc
cacatcgtgggcgctctcctggtgtccgtggagccacaggctttctctggcctgagacag
atccggctgctcaacctctccagcaacttcttgtccactctggaggagagcaccttccac
tcagtcaacacgctggagacgctgcgggtggacaggaaccccctggcctgcgactgccgg
ctcctctggatcctgcagcggcggaagacgctcaacttcgacgggcagcagcccatgtgc
tcctcgccgcccgaaatccagggcaacgccctgcgcgacttcccagactcggtgctcttc
gagtacttcacctgccagaagcccaagatccgggatcggaagctgcagcacgtgacggcg
cgggaggggcagtccgtgtccttcctgtgccgggccgatggggagcccgacccctccatc
gcctgggtgtccccccagcaccgcatgatcaccacccgcagcacggggagggccacggtg
ctgcctgggggcaccctggagatccgctttgcccaggtgcaggacagcggcacctacatc
tgcatcgccagcaacgccggcggcaacgacacctacttcgccacgctgacggtcaagggg
cgcccggccgacggcgcccaccacgccaaccggaccttgtacctcagcgacttcaacgac
accttccacaacgacacccaggtcttcttgaagttcaccttggacctcaagaccatcctg
gtctccacggccatgggctgcatcaccttcttgggtgtggtgctcttctgcttcctcctg
ctcttcgtctggagccgcgggcgggggcagcacaagaacaacttctccgtggaatattcc
ttccgcaaggtggatggtcccaccaccaccaccggccaaggaggggccaggaaattcaac
atgaagatgatctga
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