Cinclus cinclus (white-throated dipper): 134054405
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Entry
134054405 CDS
T10813
Name
(RefSeq) platelet glycoprotein Ib alpha chain-like
KO
K06261
platelet glycoprotein Ib alpha chain
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04512
ECM-receptor interaction
Brite
CD molecules [BR:
ccic04090
]
Proteins
134054405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRR_LRWD1
LRR_9
LRR_5
LRR_EndoS
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
134054405
NCBI-ProteinID:
XP_062366129
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Position
28:953080..956196
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AA seq
723 aa
AA seq
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MLEDLQAMQVLALTLVTLLVLLPPAQPCPSEMNKVKDLLEVNCTGLALSAVPSDLPADTG
ILLLSNNRLESLSTAAFLPLTQLQDIDLANNGLVALHTGARLPFLKELTLSHNALVALPV
LEGLPALTHLAVAHNSLDTLAPGAFRTVPQLQNLDLRGNKMQQLPQEAFAGLRALRELDL
SDNCLKALPKELLQDLQKLETLWLSGNQLQTLPTDFFPKGHLFMYVFLTENPWHCNCDLH
YLQTWIQKNADIVYWPERGLEETKVEVAPEKVVCHSPAEHRQKPIIHFKLNCSIMEDADE
EGGNEYNYEEETTTEKATMTTFPLHPFIPKEHTTTPFAVTSSCLPTFTTTRSPLTRPSFS
TPRTSTLSPSTLFVMLASIRALSTITPVPASPTMTPTQTPSTATVLTAATTITLHRPATP
DNATSLPMTMSSSSSSTSGHPQTILAASTIRGSLMGSAGTFPTSSMALPSTAMLEASSIV
RSPSLPLMLADTMLSTHAAALPPPLDTTHFTQPAYSPLPAPLPLCPCSISGRAVPVLRFQ
ASGEGPQWGQWVLRHCCLLHWVLYLASSALLILTMLALAGWLPWMCLVGQPSRHQSLQTQ
EVWYPLLEWRESTGNPMMQLSSFKIPLQRPTFCTIKEVELCPEVTYCTIKDLGIQHSPPA
SYSFCTTKELWVHHSPLHTSVKPFSRKLMVTDFGFLRTPSAYSLDRGVKAIGDVRVKYMG
NTM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagatctgcaggccatgcaggtccttgccctgaccctggtcactctcctggtc
ctgctgcccccagcccagccctgcccttcagagatgaacaaggtcaaggatctcctggag
gtgaactgcactgggctggctctcagcgcagtgccctcagacctgcctgcggacacaggc
atcctgctgctcagcaacaatcgcctggagtccctctccactgctgcctttctgcccctc
acccagcttcaggacatcgacctggccaacaatgggctggtggctctgcacacgggggcc
aggctgccattcctgaaggagctgaccctctcccacaatgccctggtggccctacctgtc
ctggagggcctccccgcactcacccacctggctgtggcccacaacagcctggacacactg
gccccaggagctttccgcacagtgccgcagctgcagaacctggacttgcgaggcaacaag
atgcagcagctgccccaggaggcctttgcagggctgagggcactcagggagttggatctc
tcagataactgcctgaaggcactacccaaggagttgctgcaggacctgcaaaagttggag
actctctggctctcaggaaaccagctgcagaccctgcccactgactttttcccaaagggg
cacctcttcatgtatgttttcctcactgagaacccatggcattgcaactgtgacctgcac
tacctccagacctggatccagaagaatgctgacattgtttattggccagagaggggcctg
gaggaaacaaaggtggaggttgcacctgagaaggttgtgtgccacagccctgctgagcat
aggcagaagcccatcattcacttcaagcttaactgcagcatcatggaggatgcagatgag
gaaggagggaatgaatacaattatgaggaagaaacaacaacagagaaagctaccatgacc
accttccccctacatccattcatccccaaagagcacactaccacgccctttgctgttacc
tcatcttgccttcctaccttcactaccacaagatctcccctcacccgaccttccttcagt
acccctcgtacctccaccctttccccaagcactttgtttgtgatgctggcaagcatcaga
gctctcagcaccatcactcctgtaccagccagtcccaccatgacacccacacagaccccc
agcactgccactgttctcactgctgctaccaccatcaccctgcacagacctgccacccct
gacaatgccacctctctgccaatgactatgagcagcagctcttctagcaccagtggccat
ccacaaaccatccttgctgccagcactatccgtggcagtctcatggggtccgctggcaca
tttcccaccagttccatggcactgccttctactgccatgctagaggcctcttccattgtc
agatctccatctcttcctctgatgttggctgacaccatgctttccactcatgctgcagca
ctaccacctcccctggacaccacacacttcacccagcctgcatattctccactacctgct
cctcttcccctctgcccatgctccatctcaggacgggctgtacctgtgctgcgttttcag
gccagtggggagggtccacagtggggacagtgggtgctgaggcactgctgcctgttgcac
tgggtgctctacctggcttcctcagctctgctaatcctgaccatgctggctctagcaggt
tggctgccatggatgtgtctggtgggacaaccttccaggcaccagtctctgcagacccaa
gaggtgtggtatccactgctggaatggagggagtcaacaggaaaccctatgatgcaactc
agcagcttcaaaatccccctccagcgacccacattctgtacaatcaaggaagtggagttg
tgccctgaagttacctactgcacaattaaagatctggggatacagcacagtcctcctgca
agttactccttctgcaccacaaaggagttgtgggttcaccacagtcctctgcacacatca
gtcaagcctttctccaggaagctgatggtcacagactttggcttcctgaggaccccatct
gcttacagcctggacaggggtgtcaaggccattggtgatgtcagagtgaaatatatgggt
aacaccatgtga
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