Cinclus cinclus (white-throated dipper): 134054444
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Entry
134054444 CDS
T10813
Name
(RefSeq) scaffold attachment factor B1-like isoform X1
KO
K25092
scaffold attachment factor B
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134054444
Spliceosome [BR:
ccic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
134054444
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SAP
RRM_5
Motif
Other DBs
NCBI-GeneID:
134054444
NCBI-ProteinID:
XP_062366217
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All DBs
Position
28:3576615..3595911
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AA seq
916 aa
AA seq
DB search
MAESQSAAGLGDFTSLGGAVAFGSEPETRRLSELRVIDLRAELKRRNLDSGGNKSVLMER
LRKAIEEEGGDPDEIPVASELTTKRMPKRTSKGRKPEEEGVEDNGLEENSRDGQEDIEAN
LDTLQDIDMMDISVLDEAEIDNSSAVDCGEDYSPDNILDSLSDNKDNVEAEMKELPDQLT
ENEEDYDEIENNLEASSSDLIEMKKMEKLHMEPENEKILDILGETCKSELLNEEPPEAER
PRAQEASNAGPGKRLAEEEDALAAAQLEEDALALDSKSAQALARKEAKRLVVAKGETSEQ
SPEEEAPDSEGVVVETLSDQSSKRSQGLEASSGETAEKGAGAEARDSKEDGKRAEDKANS
EESSPATKESSASEGGDQKKSPVDEDRDTKIISKDEKGRSAGSSGRNFWVSGLASTTRAT
DLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTAEEATKCITHLHKTELHGKIISVE
KAKNEPAGKKTSEKKESEAKRETVSERPGGAKRDEKSDQKDDSKKTEDKDEKEKKDKDDQ
KSGSSDQPKTVKSGSKGTERTVVMDKSKGEPVISVKTSSTSKDRSVKSQDRKSESRERQG
IVPFDKIKAQRKMREAEQRRTRERRERQQHLQTIREREERERLEIARERLEIERQRLERE
RMERERLERERMHIEHERRREQDRIQREREELRRQHEQLRYEQERRSAMRRPYDIDGRRD
DPYWPEAKRMAMNDRYHSDFSRQDRFHDFDHRDRGRYQEHSIDRRDGSRTIMGDRDGQHY
PDERHGGPERHSRDSRDSWGSYGSDRRMSESRGIPPQSRDGRDWGDHNRKFDGHQDRSWQ
SSVDGGMIGRDHERWQGGGRGRPGHVMHRGGMSGRGSFMQGGNQSQIMHGGGMQGEGFAG
QERANRPNDPRFNRRY
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtcaatcagcggccggactgggggatttcacatcccttggtggggccgtg
gcttttggttccgaacccgaaacccggcggctgagcgagctgcgagtcatcgacctgcgg
gctgagctcaagcggcgtaacctggacagcggggggaacaagagcgtcctcatggagcgg
ctgaggaaggccattgaggaggaaggaggagatcctgatgaaattcccgtggcctcagag
ctgaccacaaagagaatgccaaaaagaactagcaaaggaagaaaaccagaagaggaaggt
gtggaagacaatggtctagaagaaaactccagagatgggcaggaggatattgaagcaaat
ctggataccttacaggatattgacatgatggatattagtgtattagatgaagctgaaata
gataacagcagtgctgtagactgtggggaagattatagtcctgacaatattctcgattct
ctgtctgataataaagataatgttgaagcagagatgaaagagcttcctgatcagctaaca
gaaaatgaggaagattatgatgaaattgaaaacaatttagaagcttcctcttctgattta
attgaaatgaagaaaatggagaaactacacatggagccagaaaatgagaaaatactcgac
attttgggggaaacttgtaaatctgagctacttaacgaagaacctcccgaagcggagcgg
ccgcgtgcgcaggaagccagtaacgcggggccaggcaagaggctggctgaggaagaggac
gctctcgctgccgctcagctggaggaagatgctttagctttggacagcaaatcggcccaa
gctttggcaaggaaggaagcaaagcgtttagtggtagcaaaaggggagacaagtgaacag
agccccgaggaagaggccccggactctgaaggtgtagtggtagagaccctaagcgatcag
agtagcaaacgctcccaaggcctggaagcctctagtggggagacagcggagaaaggcgca
ggtgccgaagccagagatagcaaagaagatggcaagagagcagaagacaaagctaattct
gaggaatcttcccctgccactaaagagtcctcagccagtgagggcggtgatcagaaaaag
agccctgttgacgaggacagagatacaaagataatctcaaaagatgagaaaggtcgcagt
gctggcagttctggtagaaacttttgggtgagtggattggcttccaccaccagagctaca
gatctgaagaatctgtttagcaaatatggaaaggtggtgggggccaaggtggtgaccaac
gctcgcagtcctggtgctcgctgctacggctttgtcaccatgtccacagctgaggaggcc
accaagtgcatcacccacctgcacaagacagagctgcatggcaagatcatttctgtggaa
aaagcaaaaaacgaacccgctgggaagaagacaagtgaaaaaaaagagagtgaagcaaag
agagaaacagtcagtgagagacctggtggtgcaaaaagggatgaaaaatctgaccaaaaa
gatgattctaaaaagacagaagataaagatgaaaaggaaaagaaagataaagatgaccag
aagtctggttcatcagatcagcctaaaactgttaaatcaggaagtaaaggaacagagaga
acggtagtcatggataaatccaaaggagaacctgttattagtgtgaaaacatccagtaca
tcaaaggacagaagcgttaagagccaggaccgcaaatcagagagcagagagagacaaggg
attgtcccctttgacaaaataaaagcacagagaaaaatgagggaggcagagcagcgccgc
acccgcgagcgccgggagcggcagcagcacctccagaccatccgcgagcgggaagagagg
gagaggctggagattgctcgggagaggctggaaatcgaaaggcagcgcctggaacgggag
cggatggagagggagaggctggaaagggaacggatgcacatcgagcacgagaggaggagg
gagcaggaccggatccagcgcgagagggaggagctgcggcgccagcacgagcagctgcgc
tacgagcaggagcggcgctctgccatgaggagaccttatgacatagatggcaggagggat
gatccatactggccagaggcaaaacgaatggccatgaatgacaggtaccactcagacttc
agtcgccaggatcgcttccacgactttgatcacagggatcgtgggcgttaccaggagcat
tcaatagacaggagggatggatccagaacaattatgggagatcgggatggacaacattac
ccagacgagcggcacgggggccccgagcggcactcgcgggactcgcgggacagctgggga
agctacggctccgacaggaggatgagtgagagcagagggatccccccccagtcacgggat
ggacgtgactggggagatcacaatcgaaagtttgatggtcaccaagatcgttcctggcag
agcagtgtggatggagggatgataggacgggatcatgagagatggcaaggtggtggtaga
ggcagacctggccatgtgatgcaccgtggaggcatgtcagggcgtggcagtttcatgcag
ggtggcaatcagagtcagatcatgcatggaggaggaatgcaaggagaaggatttgctggc
caggaaagggcaaacagaccgaatgatcctcgtttcaaccgtcgctactga
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