Cinclus cinclus (white-throated dipper): 134054453
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Entry
134054453 CDS
T10813
Symbol
SBNO2
Name
(RefSeq) protein strawberry notch homolog 2
KO
K26273
protein strawberry notch
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134054453 (SBNO2)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134054453 (SBNO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
134054453
NCBI-ProteinID:
XP_062366233
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All DBs
Position
28:complement(4094523..4141431)
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AA seq
1415 aa
AA seq
DB search
MPSAHPAMDGGNSFPQHQQPGDAIHSIPGLHSQLAVPDMENSMLAADSWSTCYSVSFPTS
SFPSENQQYFNPPQDFYMDSTSRPHFLDTDYATVDPTDFLPKNGGFPQDSSYLDELSKNN
SLFSSPADSLSDIVDPKDFLPADSLNHVPTLWDVNTPQQNQIELFSPSTPFPGLNSSSDY
IPAVPNTPLLISYQSQAPAEDEDEGEEEETEELGQTETYAEYIPSKSKIGKHHPDLVVET
STLSSVPPPDITYSLSLPSSVADKGSLSALQLEAIIYACQQHEVLLPNGQRAGFLIGDGA
GVGKGRTVAGIIFENYLKGRKKALWFSVSNDLKYDAERDLKDIEASHIPVHALNKIKYGD
TATSEGVLFATYSALIGESQAGGQHRTRLKQILEWCRENFEGVIVFDECHKAKNASSTKM
GKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRAFDEFLHAIEKRGV
GAMEIVAMDMKVSGMYIARQLSFTGVTFRIEEIPLDAQYKAVYDKAAKLWAEALIVFQQA
ADCIGLESRKSLWGQFWSAHQRFFKYLCIAAKVPRLVKLAQEELARDKCIVIGLQSTGEA
RTREVLDENDGHLNCFISAAEGVFLSLVQKHFPSTKRKREKGTGIKRKRRPRGRCPKALR
GPCDQAVVIKISDDSSTDSDMGLDSDLTSSPESLLETDDVIFVDHTFGSCTGEDRGSFHM
LPSPKELHGLRELKVEKMKQDLLAKVKALGKDLPSNTLDELIYYFGGPENVAEMTGRKGR
LVRRPDGSVLFESRAEQGLSIDHVNLKEKERFMQGEKLVAIISEASSSGISLQADRRVKN
QKRRVHMTLELPWSADRAIQQFGRTHRSNQVSAPEYVFLISELAGERRFASIVAKRLESL
GALTHGDRRATESRDLSKYNFENKYGAKALDRVLSTILSHTENRVPVPRSYERGEDTFFH
EMKQGLISVGICCSQMKYGTVSVEKDCSITKFLNRILGLEVDKQNMLFQYFSDTFDYLIE
KDKKEGKYDMGILDLAPGVDEIYEESKEVFLTPGHPQDGQVVFYKISVDRGLKWEEAYEK
SLTLTGTFDGFYLSYKVRGSKYTCLLAEQCRGKNFILYKPNIGKQSQPESLDSLQKKYRK
VLPEEAKEHWESSYHFSLKNCNHAVWNKTCKLIQEGKECFQGMRLRHYYMLCGALLRVWS
RIAGIMADITSSSYLQIVRLKTKEKKKQVGIKIPESCVHRVRDELKQMDEDVKRKHSRLH
QAQEQSSSFSLPLHILPGPGLPLPSLCQDEILDLTYSPPSSSIPDAVLNPETRALCFSSE
PSLQPQPQQQHRLSCGFGHTPGLEGSAAPGPLLHEPPALPPLPPLQQPQEDFLQQDGNIN
FREILEDMLRPSNWPSQENLLPPERQSVIQFSGPF
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagctcaccctgccatggatggggggaacagcttcccacagcaccagcagccg
ggcgatgccatccacagcatccctggcctccactcccagctcgccgtgccagacatggag
aattccatgctggccgccgattcatggagtacctgctactcagtgtctttcccaacctca
tctttcccaagtgaaaaccagcaatattttaacccccctcaggatttttatatggattct
accagcagaccacatttcttggatacagactatgcaactgtggaccccactgacttctta
ccaaaaaatgggggttttcctcaggattcttcatacctcgatgagctctccaaaaacaac
tccctcttctcatcccctgcggattccctctcggacatcgtggatcccaaggacttcctg
cccgccgacagcctgaaccacgtgccaacactatgggatgtgaacacaccacagcagaac
cagatcgagctcttctcacccagcacaccattccctggcctgaacagctccagtgactac
attcctgctgtccccaacacccctctcctcatcagctaccagtctcaggctcctgcagag
gatgaagatgaaggtgaggaagaagaaactgaagagttagggcagacagagacctatgca
gaatatatcccttcaaagtccaagattgggaagcaccatcctgacctggtggttgagact
agcaccctgtccagcgttcccccacctgacatcacctacagcctttccctgcccagctcc
gtggctgacaaaggctccctgtctgcactgcagctggaagctatcatctatgcctgccag
caacatgaagttttattgcccaatggacagcgagctgggttcctgatcggggacggtgct
ggagttgggaagggcaggactgttgcaggcatcatctttgaaaattatcttaaagggagg
aaaaaagctctgtggttcagcgtctccaacgatctcaagtatgatgctgagagagacctg
aaggacatcgaggcctctcacattcctgtgcatgccctgaacaagattaaatacggtgac
acagctacctcagaaggagtcctctttgccacctactcggcgctgatcggtgaaagccag
gccgggggacagcacaggacacgcttaaaacagattttggagtggtgcagggaaaacttt
gagggagttattgtgtttgatgaatgccacaaagccaaaaatgccagctctaccaaaatg
ggcaaagcagtgctggacctgcagaacaagctgcctcgagcgagggttgtctatgccagt
gccacaggtgcctcggagccaaaaaacatgatttacatgagccgcctggggatctggggg
gagggaacaccattccgagccttcgatgagttcctgcatgcaattgagaagaggggagtc
ggtgcaatggagatcgtggccatggacatgaaggtcagtgggatgtacattgctcggcag
ctcagcttcactggagtgaccttcaggattgaggagatccctctggacgcgcagtacaag
gctgtctacgacaaggcagccaagctgtgggcagaggccttgatagtgttccagcaggca
gctgactgcatcgggctggagtctcggaagtcactgtggggtcagttctggtcagctcac
cagcgcttcttcaagtacctctgcatcgctgccaaggtgccacggctcgtgaagctggcc
caggaggagctggccagggacaagtgcattgtcattggcctgcagtccacgggggaggct
cgcaccagggaggttctggatgaaaacgatgggcacctcaactgctttatctctgctgca
gaaggcgtctttctatcactagttcagaagcactttccttcaaccaaaagaaagagagaa
aaaggaactggcattaaaagaaaacggcggccgaggggccgctgccccaaggctctacgg
ggcccgtgtgaccaagcagttgtcatcaagatcagtgatgacagcagcaccgactcggac
atgggactggacagcgacctcacctcctccccggagtccctgttagagacggacgacgtc
atctttgtggatcacacgtttggcagctgcactggggaggacaggggtagtttccacatg
ctgccttccccaaaagagctgcatggcctgagagagctgaaggttgaaaagatgaaacag
gaccttctagcaaaagtgaaagcactgggcaaagacctaccttccaacaccttggatgaa
ctgatctattattttgggggcccggagaacgtggccgagatgacaggccggaagggacgc
ctggttcgcaggcccgacggctccgtcctgttcgagtcccgcgccgagcaagggctctcc
atagaccacgtcaacctgaaggagaaggagcgtttcatgcagggggaaaagctcgtagcg
ataatctcagaggcctccagctcagggatctccctccaagcagacagacgggtgaagaac
cagaagcgccgggtgcacatgaccctggagctgccctggagcgcagaccgggccatccaa
cagtttggccgaacgcaccgatccaaccaggtctctgctcctgagtatgtgttcctcatc
tcagagctggcaggggagaggaggtttgcatccatcgtggcaaaacgactggagagcctg
ggtgccttaactcacggggaccgacgggccactgagtcccgggacctcagcaagtacaac
ttcgagaacaagtacggggccaaagccctggacagagtcctgtccacgatcctcagccac
acagagaacagggttcctgtgcccaggagctacgagagaggggaggacaccttcttccat
gaaatgaagcaagggctcatctctgtgggcatctgctgcagccagatgaagtatggcact
gtctctgtggagaaggactgctccatcaccaaattcctgaaccgcatcctgggcctggag
gtggacaagcagaacatgctcttccagtatttttctgacacctttgactatctgattgag
aaggacaagaaggagggcaaatacgacatgggcatccttgatttagccccaggagtggat
gagatctacgaggagagcaaggaggttttcctgaccccagggcacccacaggatgggcag
gttgtgttttacaagatcagcgttgacagaggcttaaagtgggaggaagcctatgagaag
tcactcacactgacaggaaccttcgatgggttctacctctcctacaaggtgcgaggcagc
aaatacacctgtctgctggcagagcagtgccgtgggaagaacttcatcctctacaagcca
aatattgggaagcaaagccagcctgagagcctggacagcctgcagaagaaataccggaag
gtgctgcccgaggaagccaaggagcactgggagagcagctaccacttctccttgaagaac
tgtaaccatgctgtgtggaacaagacctgcaagctgatccaggaggggaaggaatgcttc
cagggcatgcgcctgaggcactactacatgctgtgtggggccctgctgcgagtgtggagc
aggatcgctggcatcatggcagacatcaccagcagcagctacctgcagattgtgcgcctc
aagaccaaggagaagaagaaacaagttgggataaagatccccgagagctgcgtccacagg
gtgagggatgagctgaagcagatggatgaggatgtgaagaggaagcacagccgactgcac
caggcccaggagcagagctcatccttctccctgccactgcacatcctgccagggcctggg
ctgcccctgccctccctatgccaggatgagatcctggacttgacctacagccctcccagc
agcagcattcccgacgcggtgttgaaccccgagaccagagcactctgcttctcctcagag
ccctccctgcagccccagccccagcagcagcacagactgtcctgtggctttggccacact
cctggcctggagggcagtgcagcccccggccccttgctgcacgagccccctgctctgccc
ccccttccccccctgcagcagccacaggaggattttctccagcaagatgggaatatcaat
tttagagagatcctggaggacatgctgaggccgtcgaactggccctcccaggagaacctg
ctccccccagaacgccagagcgtgatccagttcagtgggcctttctag
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integrated database retrieval system
