Entry
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
KO
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Enzymes [BR:ccic01000 ]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.66 [histone H3]-trimethyl-L-lysine9 demethylase
134054457 (KDM4B)
1.14.11.69 [histone H3]-trimethyl-L-lysine36 demethylase
134054457 (KDM4B)
Chromosome and associated proteins [BR:ccic03036 ]
Eukaryotic type
Histone modification proteins
Histone demethylases
134054457 (KDM4B)
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Other DBs
LinkDB
All DBs
Position
28:complement(5179798..5250284)
Genome browser
AA seq
1086 aa AA seq DB search
MGSENPSPQNPGCKIMTFRPSLDEFRDFGRFIAHMESQGAHRAGLAKVIPPKEWKPRRTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYELWKQGKDIAVLDHMKPTALSSPELDAWNE
TKAELKAKMLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDLEEEERSKGMEGEAGECKARPRPPKAKGERKKKQQPFHPQPPVPPPQQPPEAGP
GPARPQGPSPTPAMGQGRPPAPLNVVQPSEAPAEEEDFKPRPIIPMLYVVPRSKKVVFDK
EHMSCQQAFEQFATQKGLGWREPGPAKDQDGAEAEHARLATEAASAFSKMKMEIKKSRRH
PLGKPPTRSPLSVVKQETSSDEEMFPFSGEEDMSDPEALKSLLSFQWKNKALNFPAERKF
NAAAALSDPYCAVCTLFYPYNQSSQVEREAAPGSAGEPPSFVHLSKCGQRSKPLIPEMCF
TSSGENTEPLPSNSYIGEDGTSPLISCAKCCLQVHASCYGIRPELVNESWACSRCSAGAW
AAECCLCNLRGGALQMTTDGRWVHVICAIAVPEARFLNVIERHPVDISAIPEQRWKLRCV
YCRKRMKKVSGACVQCSYEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANQNV
PFRREVALGQTVITKNRNGLYYRCRVIGTSTQTFYEVNFDDGSYSDNVYPESIISRDCIQ
MGPPPEGELVQLQWTDGIIYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKR
VKSRLSLSTGAPQEDVFSGDEVRAAKRPRLGNPRNPEEYGQTPDYLAFMESLLQTQYQPG
TQSNMF
NT seq
3261 nt NT seq +upstream nt +downstream nt
atggggtcggaaaacccgagcccgcagaaccctggctgtaagatcatgaccttccgaccc
tccctggacgagttccgcgacttcgggaggttcattgcccacatggagtcccagggagcc
caccgggctgggctggccaaggtgatcccccccaaggagtggaagccacggcggacgtac
gatgacattgatgacatggtgatcccagcccccatccagcaggtggtcacgggccagtcc
gggctcttcacccagtacaacatccagaagaagcccatgaccgtgggcgagtaccggcgc
ctggccaacagcgagaagtactgcacccctcggcaccaggactttgaggacctggagcgc
aagtactggaagaacctgacctttgtgtctcccatttatggggctgacatcagtggctcc
ctgtatgatgcagacgtggatgagtggaacattggcaatctgaacacgctcctggacatg
gtggagcacgagtgtggcatcatcatcgagggtgtgaacactccctacctctactttggg
atgtggaagacaacttttgcttggcatacagaggacatggatctctacagcatcaactac
ttgcattttggggagcccaaatcctggtatgccattcccccggagcacggcaagaggctg
gaacgcctggccaaaggatttttcccaggaagctctcagggatgtgatgctttcctccgg
cacaagatgaccctcatttctccctccatcctgaagaaatatgggatcccctttgacagg
atcacccaggaagctggagagtttatgatcacatttccttatggttaccacgctggcttc
aaccacggcttcaactgtgcagagtccaccaactttgccaccctgcgctggatcgactac
gggaaaatggcaacacagtgcacgtgccgtaaggacatggtgaagatctccatggatgtg
tttgtcagggtgctgcagcccgagcgctacgagctctggaagcagggcaaggacatagct
gtcctggaccacatgaagcccacggccctgagcagccccgagctggacgcctggaacgag
accaaggcagagctgaaggccaaaatgctgcgcaggataggagatgaggaagaggacaac
aaacaccggtctcacagaaaaaggagtcaacccagaagacacaaaacagaggatcagaag
tctcttggggatgtcatggctattgaaactgccttggaagatgtgaaagtaaaagaggag
ctgaaaagggggccggatctggaggaagaggagagaagcaaagggatggagggagaagca
ggggagtgcaaggcccggccgcggcccccgaaggccaagggcgagaggaagaagaagcag
cagccgttccacccccagccccccgtgccgcccccacagcagccccccgaggccgggccg
ggcccggctcggcctcagggaccctccccgaccccggccatggggcagggccgacccccg
gcccccctgaacgtggtgcagccctcggaggcgccggccgaggaggaggacttcaagcct
cggcccatcatccccatgctgtacgtggtgccccgcagcaagaaggtggtgtttgacaag
gagcacatgtcctgccagcaggccttcgagcagttcgccacgcagaaggggctgggctgg
cgagagccgggccccgccaaggaccaggacggcgccgaggccgagcacgcccggctggcc
accgaggctgcttctgccttctccaagatgaagatggagatcaagaagagccggcggcac
ccgctgggcaagcccccgacgcgctccccgctgtccgtggtcaaacaggagacctcgagc
gacgaggaaatgtttccattttctggagaggaagatatgagtgatccagaggctttgaaa
tctttactttccttccagtggaagaacaaagcacttaattttccagctgaaaggaagttc
aatgcagctgctgccctgagtgatccatactgtgctgtctgcaccctcttttatccctat
aaccagtcctcacaggtggagagggaagctgccccggggtctgcaggggagccaccctcc
ttcgtgcacctctccaagtgtgggcagaggagcaagcccctgatcccagagatgtgcttc
acctcaagtggagagaacaccgagccccttccttcaaactcctacattggagaggatgga
accagtcccttgatctcctgtgccaaatgctgcctgcaggttcatgctagctgttacggg
attcggccggagctggtgaacgagagctgggcgtgctcgcggtgctcggccggcgcctgg
gcagcggaatgctgcctgtgcaatctcaggggaggagctctccagatgaccactgatggc
cggtgggtgcacgtgatctgtgctattgctgttcccgaggcgcgtttcctcaatgtcatc
gagcgtcatcctgtggatatcagcgccatccccgagcagaggtggaaactgaggtgtgtg
tactgcaggaagaggatgaagaaggtctcgggggcctgtgtgcagtgttcctacgagcac
tgctccacgtcgttccacgtgacgtgcgcgcacgcggccggcgtgcccatggagcccgac
gactggccctacgtcgtgtccatcacctgcttcaagcacaaagcagcaaaccagaacgtg
ccgttccggagggaggtggccctggggcagacagtgatcaccaagaacaggaacgggctc
tactatcgctgcagggtcattggcaccagcacccagaccttctacgaagtgaacttcgat
gatggctcctacagtgacaacgtttaccccgagagcatcattagcagggactgcatccag
atggggccccctccagagggggagctggtgcagctgcagtggacggatgggatcatctac
aaggccaagttcattgcagcccagatcagtcagatttaccaggtggagtttgaagatggc
tctcagctaatggtgaagcgtggggatatttataccttggaggaagagcttcccaagaga
gtcaagtctcgcctgtccctcagcactggggcccctcaggaagatgtattttcgggagat
gaagtgagagctgccaagcgtccccggctggggaatcccagaaatcctgaagaatatgga
caaaccccagattacctggcctttatggagagcctgttgcagacacagtaccagcctggg
actcagagcaacatgttttaa