Cinclus cinclus (white-throated dipper): 134054870
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Entry
134054870 CDS
T10813
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134054870 (SMARCC2)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134054870 (SMARCC2)
PBAF complex
134054870 (SMARCC2)
GBAF(ncBAF) complex
134054870 (SMARCC2)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134054870
NCBI-ProteinID:
XP_062366851
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Position
30:2230403..2241090
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AA seq
1214 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLGKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDPPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVSDEKSPVTRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEELVSETVKGKPELQQPTSASQQMLNFPDKSKE
KPADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHV
GSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPR
VASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASDE
PERIEESGTEEARAEAQPTEEKKEAKEPRDGSAEEEAKEKPGETPKKEEEKGKEVEGEKE
PDKGDGDSTGEPEKEKEVKEGPDEAPKEPPEPEAERKAKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQHLQQQQQQQQPPLPPGAQPLPATAAPLAPAAHPLAAP
PAPTMVGPAEPVGQPLPGAPPPQPPPPLGAPAVPHAPAPFPGQQPPPSQSLAGTLGGGSS
GSSSSSSSSSGHPAVPGNATAALPFGLPVPTLPPSMANPPCEPFPANPAPLPLHGALASS
MPGVGGLPPNAHPAGLALPPLPGGSAAAHSPAIVAAVQGSLLPNPGLLADQGPPLQPEPI
VPTPSTATPVPPTQ
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtgcgactttggctcggcaagaactacaagaagtacatccag
gccgagccccccaccaacaaatcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtgttcgggaagcacgtcagcaacgcgcccctcaccaagctgccgatcaaatgc
ttcctggatttcaaggcggggggggccctgtgccacatcctggcagccgcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcgcatggaccgcaac
gtggagatgttcatgaccatcgagaaatccttggtgcagaacaactgcctggctcggccc
aacatcttcctgcaccaggagatcgagcccaaactgctggggaagctcaaggacatcgtc
aagcggcaccagggcaccgtgactgaggacaagagcaacgcatcccacatcgtgtgcccc
gtgcccgggaacctggaggaagaggagtgggtccggcccgtcatgaagcgtgacaagcag
gtgctgctgcactgggggtactaccccgacagctatgacacctggatcccagccagcgag
atcgaggcgtccgtggaggatcccccgacaccggagaagccccggaaggtccatgccaag
tggatcctggacacggacaccttcaacgagtggatgaacgaggaggattatgaggtgtcg
gatgagaagagccctgtgacccgcaggaagaagatctcagccaagacactgacggatgag
gtgaacagccctgactcggaccggcgtgacaagaaaggaggcaactacaagaagaggaag
cgctcgccctccccctcgcccacccccgaggccaagaagaagaatgcgaagaagggaccc
tccaccccctacaacaaatccaagcgcggacaccgcgaggaggagcaggaggacctgacc
aaggacatggacgagccctcgcccgtccccaacgtggaggaggtcaccctgcccaaaaca
gtcaacaccaagaaggactcggagtcagcacctgtaaaggggggcaccatgacagacctg
gatgagcaggaagatgagagcatggagacagctggcaaggatgaggaggagaacggcacg
ggcagcaaaggggagcaggccaaaaaccccgacctgcacgaggacaacgtgacagagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgcgccctgcccgagttcttcaacggcaaaaacaaatccaagacccctgaa
atatacctggcctaccgtaacttcatgatcgacacgtaccggctgaacccgcaggagtac
ctgacctccacagcctgccggcgcaacctggccggagatgtctgtgccatcatgcgggtc
cacgccttcctggagcagtggggtctcatcaattaccaggtggacgccgagagccggccc
acccccatgggccccccacccacctcgcacttccacgtgctggccgacacgccctcgggg
ctggtgccgctgcagcccaagacgccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatcgaggagctggtcagcgagacggtgaaggggaagccggag
ctgcagcagccgacctcggcctcgcagcagatgctgaacttccccgacaagagcaaggag
aagccggcggacatgcagaacttcgggctccgcaccgacatgtacaccaagaagaacgtc
ccgtccaagagcaaagctgccgccagcgccacccgggagtggacggagcaggagacactg
ctgctgctggaggcactggagatgtacaaggatgactggaacaaggtgtcggagcacgtg
ggcagccgcacgcaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggatccc
tacctggaggactcggaggcctcgctgggacccctggcctaccagcccatccccttcagc
cagtcgggcaaccccgtcatgagcaccgtggccttcctggcctctgtggtggatccacgc
gtggcctcggctgctgccaagtcagctctggaggaattctccaagatgaaggaggaggtg
cccacggcgctggtggaggcccacgtccgcaaggtggaggaggcggccaaggtgacgggc
aaggctgaccccgccttcgggctggagagcagcggcatcgccggcaccgcctcggatgag
cccgagcgcatcgaggagagcgggacagaggaggcacgggcagaagcacagccgaccgag
gaaaagaaggaggcaaaggagccccgggatggcagcgctgaggaggaggccaaggagaaa
cctggggaaacccccaagaaggaggaggagaaggggaaggaggtggagggcgagaaggag
cctgacaagggtgacggtgacagcacaggggagcccgagaaggagaaggaggtgaaggag
gggccggatgaggcgcccaaggagccgccagagcccgaggccgagcgcaaggccaaggtg
gagcgggacatcggcgaggggaacctgtcaacggccgctgctgctgccctggctgctgct
gctgtcaaggccaagcacctggcggccgtggaggagcgcaagatcaagtccctggtggct
ctgctggtggagacgcagatgaagaagctggagatcaaactgcggcacttcgaggagcta
gaaaccatcatggaccgcgaacgcgaggccctggaataccagcggcagcagctgctggcc
gaccgccaggcgttccacatggagcagctgaaatacgcggagatgcgagcccggcagcag
cacttccagcacctgcagcagcagcagcagcagcagcagcccccgctgccccccggggca
cagcccctgcccgccaccgctgcccccctggcccccgccgcccacccgctggcagcaccg
cccgcccccaccatggtgggccccgctgagcccgtggggcagcccctgcccggggccccc
ccgccgcagccgccgccgcccctgggagccccggcggtcccgcacgccccggcaccgttc
cccgggcagcagccaccgccctcgcagagcctggcggggacgctgggcggtggcagcagc
ggcagcagcagcagcagcagcagcagcagcggccaccccgccgtgcccggtaatgccacc
gcggccctgcccttcgggttgcctgtgcccaccctgcccccgagcatggctaaccctccc
tgcgagcccttccccgctaacccggcccccctcccgctgcatggggccctggccagcagc
atgccgggggtgggggggctgccccccaacgcccacccagccggcctggccctgccgccg
ctaccggggggctcggccgccgcgcacagccccgccatcgtggccgccgtgcagggaagc
ctccttcccaaccccggcctcctcgcagaccaaggtccccccctgcagccggagcccatc
gtgcccacccccagcacggccacccccgtgccccccacgcagtga
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