Cinclus cinclus (white-throated dipper): 134054912
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Entry
134054912 CDS
T10813
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic00260
Glycine, serine and threonine metabolism
ccic00630
Glyoxylate and dicarboxylate metabolism
ccic00670
One carbon pool by folate
ccic01100
Metabolic pathways
ccic01200
Carbon metabolism
ccic01230
Biosynthesis of amino acids
ccic01240
Biosynthesis of cofactors
ccic04981
Folate transport and metabolism
Module
ccic_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
134054912 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134054912 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134054912 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
134054912 (SHMT2)
Enzymes [BR:
ccic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
134054912 (SHMT2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
134054912
NCBI-ProteinID:
XP_062366957
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Position
30:complement(1878869..1884274)
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AA seq
502 aa
AA seq
DB search
MWPLRLSRTLQRWGCRVGTSSQRAQHSPAATATAPKHVPGWTGQESLAESDPEMWSLVQK
EKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCERR
ALEAFDLDPARWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMTDVKR
ISATSIFFESMPYKLDPTTGLIDYAQLEVTARLFRPRLIIAGTSAYARLIDYARIKRVCE
EVKAYLLADMAHISGLVAAKAIPSPFEHADVVTSTTHKTLRGARSGLIFYRKGVRSVDKK
TGKETLYDLEDRINFSVFPSLQGGPHNHAIAAVAVALKQASSPAFQEYCQQVLRNAKAMA
QALLQCGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDRSALTPG
GLRLGAPALTSRQFREEDFQKVVEFIDEGISLALDVKSKTSKLQDFKTFLLQDPDTQRRL
SDLRQRVETFARAFPMPGFSDH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccgcctgagcaggaccctgcagcgatgggggtgccgggtgggcaccagc
agccagcgggcacagcacagccccgctgccaccgccactgcccccaagcatgtccctggg
tggacggggcaggagagcctggccgagagcgaccctgagatgtggagcctggtgcagaag
gagaaggatcggcagtgccgggggctggagctcatcgcctctgagaatttctgcagccgg
gcggcactggaagccctgggctcctgcctcaacaacaaatactccgagggatatcctggg
aagaggtactacgggggagccgaggtggtggatcagatcgagctgctgtgcgagcggcgg
gcgctggaagcgttcgacctggaccccgcacgctggggcgtcaatgtccaaccctactcg
ggctccccggccaacttcgctgcctacacagccctgctgcagccccatgaccgcctgatg
gggctggacctgcctgatgggggacacctcacacacgggtacatgaccgatgtcaagagg
atctccgccacctccatcttctttgagtcgatgccctacaagcttgatcctaccacagga
ctgattgactatgcccagctggaggtgacagcccggctcttccgcccccggctcatcatc
gctggcaccagcgcctacgcccggctcatcgactacgcccgcatcaagagggtgtgcgag
gaggtcaaggcctacctgctggcagacatggctcacatcagcgggctggtggcggccaag
gccatcccgtcacccttcgagcacgcggacgttgtcaccagcaccacacacaagaccctg
cgcggtgccaggtcaggattgatcttctatcgcaagggcgtgcgctctgtggataagaag
acaggcaaggagaccctctacgacctggaagacaggatcaacttctccgtgttcccttcc
ctgcaggggggaccccacaaccacgccattgctgccgtggctgtggccctcaaacaggcc
agctccccggctttccaggagtactgccagcaggtgctgaggaatgccaaggccatggca
caggcactgctgcagtgtgggtacaccctggtgtcaggtggcaccgacaaccacctggtg
ctggtggacctgcgacccaagggcatcgacggggcacgggcagagcgggtgctggagctc
gtctccatcactgccaacaagaacacgtgcccgggggataggagtgcactgacacccggg
gggctgcgcctcggtgcccccgcactgacctcccgccagttccgcgaggaggatttccag
aaagtcgtggagttcatcgatgagggcatctcgctggctctggacgtcaagagcaaaacc
agtaagctccaggacttcaagactttcctgctgcaggacccggacactcagagacgcctg
agtgaccttcgccagcgtgtcgagaccttcgctcgtgccttccccatgcccggtttcagc
gaccactga
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