Cinclus cinclus (white-throated dipper): 134055201
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Entry
134055201 CDS
T10813
Symbol
SLAMF1
Name
(RefSeq) signaling lymphocytic activation molecule isoform X1
KO
K06536
signaling lymphocytic activation molecule family member 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
ccic04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
134055201 (SLAMF1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134055201 (SLAMF1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134055201 (SLAMF1)
04090 CD molecules [BR:
ccic04090
]
134055201 (SLAMF1)
Cell adhesion molecules [BR:
ccic04515
]
Immunoglobulin superfamily
SLAM/CD2 family
134055201 (SLAMF1)
CD molecules [BR:
ccic04090
]
Proteins
134055201 (SLAMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
TMEM154
SLAM
ODV-E18
PKD
DUF4307
EphA2_TM
VID27
YxzE
Motif
Other DBs
NCBI-GeneID:
134055201
NCBI-ProteinID:
XP_062367346
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All DBs
Position
31:complement(2353447..2361032)
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AA seq
338 aa
AA seq
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MGSGTWLWLLLTLGALWGIGAKKTQIGILGKPTLLEIPREFQERTEEFREASWKKIVEGS
PTKKFLLKISSVNLTEFEPERMRFHREDFSLEILNTSRDDGRLYEYSVNKGSEEELWLIQ
LQVFEPVANPIIRILHRESSNSSCSLTLLCTSERGDEVSYSWDSRDNGTGGICSGNSSIL
NISYSLRSPGFRCVCTARNLVSSLDVAFDSSQCGFEQWGGPRVRTELLVPLVVLGVIVIV
IIIVIIVTFRATRSAKRDQDSSQVTLDGADGATSATIYAQVQKPKGTVPNATPLSCTTIY
TAATGPPLATNGAPRSPNPRRHPQEPTTVYASVTLPVA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaggcacttggctctggctgctcctcactctcggagctctttgggggatcgga
gccaagaaaacgcagattggaattttgggaaaaccgacgctcctggagatcccccgtgag
ttccaggagcgcactgaggaattcagggaagcctcctggaaaaaaatcgtggaggggtca
ccgactaagaaattcctgctgaagatttccagtgtgaatttgacggagtttgagccggag
cggatgcgtttccacagggaggatttttccctggaaatcctcaacaccagccgggatgac
gggcggctctacgagtacagcgtcaacaagggctcagaggaggagctctggctgatccag
ctgcaagtgttcgagccagtggccaatcccatcatccggatcctccatcgggaatcgtcc
aacagcagctgctccctcaccctcctctgcacctcggagcggggggatgaggtttcctac
agctgggacagccgggacaacgggaccggggggatctgctctgggaacagcagcatcctg
aacatctcctattccctacggagccccggcttccgctgcgtctgcaccgccaggaatctc
gtcagcagcctggacgtggctttcgactcttcccagtgtggcttcgagcagtggggtggc
ccccgggtgaggacagagctcctcgtgccgctggtggttctcggtgtcatcgtcattgtc
atcatcatcgtcatcattgtcaccttcagggccactcgctcagccaaacgtgaccaggat
tcttcccaggtcactctggatggtgccgatggtgccaccagtgccaccatctatgcccag
gtgcagaagcccaaagggaccgtccccaacgccacccccctctcgtgcaccaccatctac
accgcggccaccgggccacccctggccaccaacggagccccccgctccccaaaccctcgg
agacacccccaggagcccaccacggtttacgccagcgtgactctccccgtggcctga
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