KEGG   Cinclus cinclus (white-throated dipper): 134055237
Entry
134055237         CDS       T10813                                 
Symbol
SF3B4
Name
(RefSeq) splicing factor 3B subunit 4 isoform X1
  KO
K12831  splicing factor 3B subunit 4
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134055237 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccic03041]
    134055237 (SF3B4)
Spliceosome [BR:ccic03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    134055237 (SF3B4)
 Complex B
    134055237 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    134055237 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 134055237
NCBI-ProteinID: XP_062367403
LinkDB
Position
31:3062224..3065926
AA seq 339 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSVPTPVVTALGPGVTPPGLPPP
GSFPPPVPPPGALPPGMPPAMPPPPMPPGAGAPGPPSGAAPAGGHPPHPHPFPPGGMHHP
ARFQQQKPLCTSACQTQLKFQTQLEFRFLGVPGAASQHP
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcggcgggaccgatttcggagaggaaccaggatgccacggtctacgtgggggggctg
gacgagaaggtcagcgagcccctgctgtgggagctcttcctgcaggccgggcccgtggtc
aacacgcacatgcccaaggaccgggtcacgggccagcaccaggggtacggctttgtggag
ttcctgagcgaggaggacgctgactacgccatcaagatcatgaacatgatcaagctctac
ggaaaacccatccgggtgaacaaggcctcggcccacaacaagaacctggacgtgggcgcc
aacatcttcattggcaacctggaccccgagattgatgagaagctgctctacgacactttc
agcgcctttggggtcatcctgcagacccccaagatcatgcgggaccccgacacgggcaac
tccaagggctacgccttcatcaactttgccagcttcgatgcatcggatgcagccatcgag
gccatgaacgggcagtacctgtgcaaccgccccatcaccgtgtcctacgccttcaagaag
gactccaagggcgagcggcacggctcggcggctgagcggctgctggcggcgcagaacccc
ctctcccaggctgaccggccccaccagctcttcgccgatgcccccccacccccatccgtg
cccacgcccgtggtcaccgcgctggggcctggggtcacccccccaggcctgcctccccct
ggctcgttcccgccgccagtgccgccgcccggagcgctgccccccgggatgcccccggcc
atgccccccccgccgatgccaccgggagccggagcccctgggcccccctcgggagccgcc
ccggccgggggacaccccccgcacccgcaccccttcccgccaggagggatgcaccaccca
gcccgtttccagcagcagaagcccctctgcacctctgcttgccagacccagctgaaattc
cagacccagctggaatttcggtttctgggagtgcctggagctgcttcccagcatccttaa

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