Cinclus cinclus (white-throated dipper): 134055382
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Entry
134055382 CDS
T10813
Symbol
ITGA10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04510
Focal adhesion
ccic04512
ECM-receptor interaction
ccic04810
Regulation of actin cytoskeleton
ccic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134055382 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134055382 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134055382 (ITGA10)
04810 Regulation of actin cytoskeleton
134055382 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134055382 (ITGA10)
Cell adhesion molecules [BR:
ccic04515
]
Integrins
Integrin alpha subunits
134055382 (ITGA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_3
FG-GAP_3
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
134055382
NCBI-ProteinID:
XP_062367696
LinkDB
All DBs
Position
31:3114972..3124423
Genome browser
AA seq
1167 aa
AA seq
DB search
MWGVGIRGVLLALFLLPGLCEGFNIDVGHPRVFQGPPESQFGYRVLQWGGDGDKWLLVGA
PWDGNGQGDIYKCAVGLQNSSCAKANLGAGAPWLRSSAGHLGMTLVDSKDGGFVACAPLW
SQECGTSVFSSGRCVQLNEKLQPMRTIAPTAQGCSTYMDIIVVLDGSNSIYPWEEVQTFL
GNILGRFFIGPGQTQVGVLQYGERLVQEWALGQHPTAQHLLEAARNLTRQEGRETRTAMA
IRQACSESFSPAQGGRPGATRLLLVVTDGESHDGDELPEALAECDRQNVTRYAIAVLGHY
LRRQQDPEDFIREIKSIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTHGDNESAF
ELEMSQIGFSIHHLEVLRCPRVDMSHPSWQDGVLFGMVGAYDWEGGVLEESQRGHVVPPR
EAFQEEFPLELKNHAAYLGYSVSSLQLPGGQRLLVAGAPRFQHKGKVVLFQLDPTGTVTV
AQALMGEQIGSYFGSEVLALDLEGDGDSDLLLVAAPTYLGDQSRETGRVYVYRVGQDRLS
PAGSLHPEPRSQDSRFGSALGAVPNLSQDGLAGAVVGAPLEDGHRGALYVFHVSPGTLLP
QCKQRIEAAALGWSLRYFGTSVDGRVDMDGDGLVDVAVGARGAAVVLRSRWIIQVSAWMS
VEPAAVSVTRRNCQRSGSSAVCLRARICFCAETRTQNPVDMDIDLRYNVSLEERIPGSRA
AFDSGARRLLQRRIEFPLGRQSCIRIPFHVLDTSDYLRPLSLSLTWALDAAARSVMDEAS
PTTIRKLIPFFKDCGDDNECVTNLVLKATTDIVGSRQSPHILRKGQRRMLVEVELENREE
NAYNASLWLHLPRNLHFSSLVLQDPSTVKLECAALGGHRRRCSVGYPVFRSQAKVSFTLE
LEFSCSILLDCAEVTLQATSDSTEATPQDNVVKLSVPIRYEPNLFLSSNTNLHRYEVHPL
GSFTHSSGPEFTTTVKVQNLGCYPIQNITLHMALPALGNHQATILSVTHVLAENATCVLQ
PPEEGTQVVLVPPEDLLHVDRLDCSNTWCQELRCRLGRLERGGGVSVQLLRTLHDSFFSR
LKFRSVRIVSSVWLGVTGDLLVLEGAQHRELVLEVLQGRRVPVSLWILGGSALGGLLLLA
LLSLGLWRLGFFSHRKPPREEEEDEEH
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtggggtgtggggatacggggggtgctcctggcgctgttcctgctcccagggctctgt
gagggattcaacatcgacgtggggcatccgcgggtcttccagggaccccccgagtcccag
ttcgggtaccgggtgctgcagtgggggggcgatggggacaagtggctgctagtgggtgcc
ccgtgggatgggaatggtcaaggtgacatctacaagtgcgccgtgggactccaaaattct
tcctgtgccaaggccaacctcggggctggagctccgtggctccgcagcagcgccggacac
ctcgggatgacgctggtggactccaaggatgggggatttgtggcgtgcgccccactttgg
tcccaggaatgtggcacctccgtgttcagctccggccgctgtgtccaactcaatgagaag
ctccagcccatgaggaccattgcacccacagcacagggctgttctacctacatggacatc
atcgtggttctggatggctccaacagcatctacccttgggaggaggtgcagacattcctt
gggaacatcctgggacgcttcttcatcggtcctgggcagacccaggtgggggtgctgcag
tatggggagcggctggtgcaggagtgggcgctggggcagcaccccacggcccagcacctg
cttgaggccgcccggaacctgacgcgtcaggaggggagggagactcggacggccatggcc
attcggcaggcatgctcagagtccttcagcccagcacaaggtgggcgcccaggggccacg
cggctgctgctggtggtgacggatggggagtcccacgatggggatgagctgccggaggcg
ctggcagagtgtgaccggcaaaatgttacccgctatgccatcgctgtcctggggcactac
ctgcgtcggcagcaggatcccgaggatttcatccgggagatcaagtccatcgccagtgat
cccgatgagaagtatttcttcaatgtcacagatgaggctgccctgaatgacatcgtggat
gctctgggagatcggatcttcagtctggaaggcacccatggggacaacgagagtgccttc
gagctggagatgtcccagatcggcttttccatccaccacctcgaggtgttgcggtgtccc
cgggttgacatgtcccacccatcgtggcaggatggggtcctctttggaatggtcggagcc
tatgactgggaagggggtgtgctggaggagagccagcgtgggcacgttgttccaccccgg
gaagcgtttcaggaggaatttccgctggagctgaagaaccatgcagcgtatctggggtac
tccgtgtcatcgctgcagctcccggggggacagcgtttgttagtggctggtgccccccgg
tttcagcacaagggcaaagttgtcctcttccagctggaccccacggggactgtgaccgtg
gcccaggcactaatgggggagcagatcggctcctactttggcagtgaggtcttggctctg
gacctggagggagatggggacagtgacctgctgctggtggctgcacccacctacctgggg
gaccagagcagggagacagggagggtctatgtgtaccgtgtggggcaggaccgcctgagc
cccgcggggtctctgcaccctgagccgaggtcgcaggattccagattcggttccgccctg
ggcgcggtgccgaacctgagccaggacgggctggctggagccgtggtgggagctccgctg
gaggacgggcaccgcggggccctctacgtgttccacgtctccccgggcaccctcctgccc
cagtgcaagcagcgcatcgaggcggcggcgctggggtggagcctccggtatttcgggacc
agcgtggacggacgggtggacatggatggggacgggctggtggacgtggccgtgggggcg
cggggtgcagctgtagtactgcggtcccgctggatcatccaggtgtctgcatggatgtcc
gtggagccagcggctgtcagtgtgacacgacggaactgccagcgcagcggctccagcgcc
gtctgcctccgggcccggatctgcttctgtgctgagacacgcacacagaaccccgtggac
atggatattgatctcaggtacaatgtatccctggaggagcggatcccaggatcccgtgct
gcctttgactcaggtgcccgccggctgctccagcgccgaattgagttcccactgggaagg
cagagctgcatccgcatccccttccacgtcctggacacctcagattacctgcggcccctc
agcctcagcctcacctgggccctggatgcagctgcgaggtcggtgatggatgaggcatct
cccaccaccatccgcaaactgatcccgtttttcaaggactgtggggacgacaacgagtgt
gtcaccaacctggtgctcaaggccaccacagatattgtgggctccaggcagagcccccac
atcctgcggaagggccagaggcggatgctggtggaggtggagctggagaaccgggaggag
aatgcctacaatgccagcctgtggctgcacctgcccaggaatctccacttctccagcctt
gtgctccaggatcccagcacggtgaagttggagtgcgcagccctgggcgggcaccgccgg
cgctgcagtgtagggtaccctgtcttccgctcacaggccaaggtgtccttcaccttggag
ctggagttcagctgctccatccttctggactgtgccgaagtcacactccaggccaccagt
gacagcactgaggcgacaccacaggacaacgtggtcaagctttctgtccccatccgctat
gagcccaacctgttcctgtccagtaacaccaacctgcatcgctacgaggttcatcccctt
ggcagcttcacccacagctctggccctgagttcaccaccacggtcaaggtgcagaatttg
gggtgctaccccatccagaacatcaccctgcacatggccctgccagctctgggcaaccat
caggccaccattctgtctgtcacccatgttctcgctgaaaatgccacctgcgtgctgcag
ccccctgaggagggaacacaggtggtcctggtgccccctgaggacctgctgcatgtagac
aggctggactgttccaacacctggtgccaggagctgaggtgccgcttggggaggctggag
cgtggtgggggagtctccgtccagctcctgcgcaccctccacgacagcttcttcagcaga
ctgaaattccgaagtgtgaggatagtcagcagtgtctggctgggagtcacaggggacttg
ttggtgctggagggggcacagcacagggagctggtgctggaagtgctccagggaaggcgg
gtgcctgtgtccctgtggatcctggggggcagtgccctgggggggctcctgctcctggcg
ctgctcagccttggcctctggaggctgggattcttttcccaccggaagcccccccgggag
gaggaggaggatgaggagcattga
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