Cinclus cinclus (white-throated dipper): 134055385
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Entry
134055385 CDS
T10813
Symbol
RNF115
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccic04131
]
134055385 (RNF115)
04121 Ubiquitin system [BR:
ccic04121
]
134055385 (RNF115)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134055385 (RNF115)
Membrane trafficking [BR:
ccic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
134055385 (RNF115)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134055385 (RNF115)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
Zn_ribbon_19
zf-Nse
zf-RING_16
DUF7560
U-box_ZFPL1
IBR_1
VPS18_RING_C
zf-RING_Vps41
zf-HC5HC2H
zf-HC5HC2H_2
Rubredoxin
Rad50_zn_hook
zf-HIT
Motif
Other DBs
NCBI-GeneID:
134055385
NCBI-ProteinID:
XP_062367701
LinkDB
All DBs
Position
31:complement(3125213..3133696)
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AA seq
302 aa
AA seq
DB search
MEREERTAGWTERARMLTLLQRSDIPTRGRISPHTGVPVFPQEYTCPRCESGFIEEVTDD
SSFFDSNALDDSPSSQFAELWDHLDHTMFFPDFRPFLSSSSLDPESRDMERGPPAELWGP
SRPPRLPMPRRYRSRGSSRPDRSPAIEGIIQQIFAGFFANSAVPGSQHPFSWSGMLHSSP
GDYAWGQSGLDAIVTQLLGQLENTGPPPADKEKILSLPTVAVTQEQVDTGLECPVCKEDY
AVAEQVRQLPCNHVFHSSCIVPWLELHDTCPVCRKSLKGEDSTRQMPNPDASDSPVQERW
TF
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggaggaaagaacagccgggtggacagagagggcacggatgctgaccctgttg
cagaggtccgatatccccacgcgggggaggatcagccctcacacgggagtccccgtgttc
ccccaggaatatacctgcccccgctgtgagtccggcttcatcgaggaagtcactgatgat
tccagtttttttgacagcaatgccctggatgacagcccctcctcacagttcgcagagctt
tgggaccacttggatcacacaatgttcttcccggatttccggccattcctgagcagcagc
tccctggatccagagagccgggatatggagaggggccctccagctgagctctgggggccc
agtcgacccccacggctgccaatgcctcggaggtaccgatcccgtggcagctcccgcccg
gatcgctcacctgccattgaggggataatacagcagatctttgctgggttttttgccaac
tcagccgttcctggctcccaacatcccttttcctggagcggaatgctgcactccagtcct
ggggattatgcgtggggacagagcggccttgacgccatcgtcacacagcttctgggacag
ctggaaaatacggggccaccgccagcagacaaggagaagatcttgtcactcccaacagtg
gcggtgacacaagaacaagtcgacacagggctggaatgcccggtgtgcaaggaggactac
gccgtggcagagcaggtccggcagctcccctgcaaccatgtcttccacagcagctgcatt
gtgccctggctggagctgcacgatacgtgtcccgtctgcaggaagagcctaaagggggaa
gattccacccggcagatgccgaatcctgacgcttccgacagcccagtgcaggagcgatgg
actttctga
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