Cinclus cinclus (white-throated dipper): 134055530
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Entry
134055530 CDS
T10813
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134055530 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134055530 (SF1)
Spliceosome [BR:
ccic03041
]
Complex A
Other components
Complex A specific factors
134055530 (SF1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
zf-CCHC_5
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
134055530
NCBI-ProteinID:
XP_062367908
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Position
33:complement(2872604..2881054)
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AA seq
636 aa
AA seq
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MATGASAAQPGPAPGPAAPRAPMAAAAFPFAALPPPPPPPPPPPPPPQPQPPAQPPPPPP
PPAQAPGGPAAPQPPGGPAAPQPPPAAPYGQFRFPSPPPGHDPPAAPAGAPPAAPAAPPQ
PAGAPQQPRPEEGAGGAGAGSGDAGGRAGAAHKPRRADFPRKRKRSRWNQDSLEQKTVIP
GMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRL
NTREFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVG
LLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMEN
VKKAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTETRSIT
NTTVCTKCGGAGHIASDCKFARPGDPQSAQDKARMDKEYLSLMAELGEAPVSVSSNAAHN
NSPLSSSHRAASQAGGQPPPSRPPWMSSAPSENRPYHGGLHGGPGGPGGPHSFPHPMAGM
GGGHGGHPLQHTPNGPPPWMQPHHPPMGGGPHPPGHPGPHHMDQYLGNAPVGSGVYRLHQ
GKGETTSPKFPHTPSSSPSPGMIPVSLIPQFPPPQV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggggcgagcgcggcccagcccggccccgctcccggtcccgccgccccccgc
gcccccatggccgccgccgctttccctttcgcggcgctgccgcctccgccgcctcctcct
ccgcctcctccgccacctccgcagccgcaaccgccggcgcagccgccaccgccgccacct
ccgcctgcgcaggccccgggcggccccgcggctccgcaacctccgggcggccccgcggcc
cctcagccgcctcccgccgctccctacgggcagttccgcttcccttcgccgccgcccggc
catgatcctcccgctgctcccgcgggggctccgccggccgcccccgccgcccccccccag
cccgcgggggctccgcagcagccgcggcccgaggagggcgcggggggcgcgggcgccggg
tccggagatgcgggaggacgggcgggagccgcgcacaagccccggagggcagatttccct
cggaagcggaagcgcagccgctggaaccaggactcgctggaacagaagacggtgatcccg
gggatgcccacggtgatcccgcccgggctgacgcgcgagcaggagcgcgcctacatcgtg
caactgcagatcgaagacctgacccgcaaactgcgcacgggagacctgggcatcccccct
aaccccgaggacaggtccccctccccggagcccatctacaacagcgaggggaagcgcctg
aacacgcgggagttccgcacgcgcaaaaagctggaggaggagaggcacaacctcatcacc
gagatggtggccctgaaccccgacttcaagcccccagctgactacaagccaccggcgacg
cgggtcagtgacaaggtgatgatcccgcaggatgagtaccccgagatcaacttcgtgggg
ctcctcatcgggcccagggggaacaccctgaagaacatcgagaaggaatgcaacgccaag
atcatgatcagaggcaagggctcggtgaaggagggcaaggtgggccgcaaggacgggcaa
atgctgccgggcgaggacgagcccctgcacgccctcgtcactgccaacaccatggagaac
gtcaagaaagccgtggagcagatcaggaacatcctgaagcagggcatcgagacccccgag
gaccagaacgatctgcgcaagatgcagctgagggagctggcacggctcaacgggaccctg
cgggaggatgacaacaggatcctgaggccgtggcagagcacggagactcgcagcatcacc
aacaccacggtgtgcaccaagtgcggcggggccgggcacatcgcttccgactgcaagttt
gccaggcctggggacccacagtctgcacaggacaaggctcggatggacaaggagtacctg
tccctgatggctgagctgggagaggccccggtgtccgtgagctccaacgctgcccacaac
aacagccccttgtccagcagccaccgtgcagccagccaggctgggggacagccccccccg
agccgccccccctggatgagctcagcaccctcagagaaccgcccctaccacggggggcta
cacggggggccgggggggccagggggtccccacagcttcccccaccccatggctggcatg
ggtggggggcacggggggcaccccctgcagcacaccccaaacgggccccccccgtggatg
cagccccatcacccccccatggggggggggccgcaccccccggggcaccccggcccccac
cacatggatcagtacctgggaaatgcgccggtgggctctggggtctatcgcctgcaccag
ggaaaaggtgagaccacctccccaaaattccctcacaccccctcaagttccccctccccg
ggtatgatccccgtgtccctgatcccccaatttccccctccccaggtatga
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