Cinclus cinclus (white-throated dipper): 134055583
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Entry
134055583 CDS
T10813
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04120
Ubiquitin mediated proteolysis
ccic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134055583 (SYVN1)
04120 Ubiquitin mediated proteolysis
134055583 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134055583 (SYVN1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134055583 (SYVN1)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134055583 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_5
U-box_ZFPL1
zf-ANAPC11
zf-RING-like
zf-RING_Vps41
zf-HC5HC2H
FAR1_N
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
134055583
NCBI-ProteinID:
XP_062367972
LinkDB
All DBs
Position
33
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AA seq
582 aa
AA seq
DB search
MLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMLLLGILDLLFVSHAYHSILTRGASVQLVFGFEYAI
LLTMVLTIFIKYVLHSIDLQNDNPWDNKAVFMLYTELLTGLIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRATLPAPAPPEPPAPAPAPPAGPQPP
QFPQGLLPPFPPGMFPFWPPVGPFPPVPGVQAPAGPDSSATAGATAPGARAGDTGSGSGS
GAAPELGAAGAVPGLPLPPPWVGMAWPPLFGVPPMPVPPAGFAGLTEDELRALEGHERQH
LEARLQCLHNIHTLLDAAMLQINQYLSVLPTIGTPRPPPAREAPPEEPPAPGPSGVTGAT
GATDPGPAEDEEDAAEGPEPHEGPDTAELRRRRLQRLGTPPH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacagctctggtcatggccgggagcctggcgctcaccacggccgtggttgcc
cacgcctactacctgaagcaccagttctaccccaccgtggtgtacctcaccaaatccagc
cccagcatggccgtgttgtacatccaggccttcgtgctcgtgttcctgctgggcaagttc
atgggcaaggttttcttcgggcagctacgagcggccgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagc
ccgcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggct
gaggaccgtgtggattttatggagaggagcccaaacatctcctggcttttccacttcaga
attgtctccctgatgctcctgctgggaatcctggatttgctgtttgtcagccacgcctac
cacagcatcctgacccgcggcgcctccgtgcagctcgtcttcggcttcgagtacgccatc
ctgctcaccatggtgctcaccatcttcatcaagtacgtgctgcactccatcgacctgcag
aacgacaacccctgggataacaaggccgtgttcatgctctacaccgagctcctcaccggg
ctgatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggttcacaccttc
ccgctcttcgccatccgccccatgtacctggccatgaggcagttcaagaaggccgtgact
gacgccatcatgtcccgcagagccatccgcaacatgaacaccctgtatcccgacgctacg
gccgaggagctgcaggccatggacaacgtgtgcatcatctgccgagaggagatggtgaca
ggagccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcgtggttc
cagcggcagcagacgtgccccacgtgccgcatggacgtgctgcgagccacgctgccagca
ccggcacccccggagcccccggcaccggcaccggcaccgccagcggggccacagcccccc
cagtttcctcaggggctcctccctcccttccccccgggaatgttcccgttctggccgccc
gtggggcccttcccgcccgtccccggtgtccaggccccggctggacccgacagctcggcc
acggcaggcgccactgctcccggtgcccgtgccggtgacaccggttccggttccggttcc
ggcgccgctccggagctcggcgctgccggggccgtgccggggctgccgctgcctccgccc
tgggtggggatggcctggccacccctcttcggcgtgccccccatgccggtgccccccgcc
ggctttgccgggctcaccgaggacgagctgagagcgctggaggggcacgagaggcagcac
ctggaggctcggctgcagtgcctgcacaacatccacaccctgctggacgctgccatgctg
cagatcaaccagtacctgagcgtgctgcccaccatcgggaccccccggccgccccctgcc
cgtgaggcccccccagaggagcccccagcaccaggaccctcgggagtcactggagccact
ggagccactgatccgggcccagctgaggatgaggaggacgcggccgaaggccccgagccc
cacgagggccccgacacggccgagctgcggcggcggcgcctgcagaggctggggaccccc
ccccactga
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