Cinclus cinclus (white-throated dipper): 134055684
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Entry
134055684 CDS
T10813
Symbol
DPF2
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134055684 (DPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134055684 (DPF2)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134055684 (DPF2)
Spliceosome [BR:
ccic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134055684 (DPF2)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
134055684 (DPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
Lectin_C
Motif
Other DBs
NCBI-GeneID:
134055684
NCBI-ProteinID:
XP_062368102
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All DBs
Position
33:3000489..3014811
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AA seq
492 aa
AA seq
DB search
MAAVVQNVVKLLGEQYYRDAMEQCHSYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
HRGPGLAAGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDTEQALKKEGLLAQDGSSLE
ALLRTDSLEKRSLPDPRMDDDSLGEFPVTNSRARKRILEPEDFLDDLDDEDYEEDTPKRR
GKGKAKGKGVGGARKKLDAAILEDRDKPYACDNSYKQKHSLKPPDRGSSALSLLVFPAFP
PFFFPTPFFISFFFSPPKKQKKKEKKKEKKKKNKTKQKIPLRDGREEGREKPKATGATSA
PAPLRPLTLFQQGMRPGKQRLTPPVEPAVGKTRSFHPNPGISTQILEFPPKSQSFHPNPG
ISTQILEFPPKSQNFHPNPGVSTQIPEFPSKSWSFHPNPRVSTQIPEFPPKSWSFHPNPA
VSTQILEFPPKSWSFHPNPQSRAPQCCFPIPNPQGFALKNSPKISGCASGVVRNLGYSQS
SRSSTSGGEFQS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggttcagaatgtggtcaagctgctgggcgagcagtactaccgggacgcc
atggagcagtgccacagctacaacgcgcggctctgcgccgagcgcagcgtgcgcctgccc
ttcctggactcccagaccggcgtggcccagagcaactgctacatctggatggagaaacgg
caccgtgggcccggtttggcagccgggcagctctactcgtacccggcgcggcgctggcgt
aagaaacgccgcgcccaccccccggaggacccccggctctccttcccctccatcaaaccc
gacacggagcaggctctgaagaaggaagggctcctggcccaggatgggagcagcctcgag
gctctgctcaggacagattccctggaaaaacgatccctgcccgaccccaggatggacgac
gacagcctgggggaattcccggtcaccaacagccgcgccaggaagcggatcctggagccg
gaagatttcctggacgatttggacgacgaggattacgaggaggacacgcccaagaggagg
gggaagggcaaggccaagggaaaaggcgtcgggggggctcggaagaagctggacgccgcc
atcctggaggacagggacaaaccctacgcgtgtgacaacagttacaaacaaaagcattcc
ttgaaacctcccgaccgaggtagttccgctctctctctgctcgtttttcctgcttttcct
cctttttttttccccaccccctttttcatttctttttttttttccccacccaaaaaacaa
aaaaaaaaagaaaaaaaaaaagaaaaaaaaaaaaaaaacaaaacaaaacaaaaaattccc
ctgcgggatgggcgggaggaggggagggagaagccaaaggccacgggagcgacgtcagcg
ccggccccgctccggcccctgacccttttccagcagggaatgaggccgggaaaacaaaga
ttaaccccccctgtggagcctgcagtgggaaaaacacggagcttccacccaaatcccgga
atttccacccaaatcctggagtttccacccaaatcccagagtttccacccaaatcctgga
atttccacccaaatcctggagtttccacccaaatcccagaatttccatccaaatcctgga
gtttccacccaaatcccagaatttccatccaaatcctggagcttccacccaaatcccaga
gtttccacccaaatcccagagtttccacccaaatcctggagtttccacccaaatcctgca
gtttccacccaaatcctggaatttccacccaaatcctggagtttccacccaaatccccaa
tccagagctccccagtgttgttttcccattccgaacccgcagggttttgccttaaaaaat
tccccaaaaatatcaggatgtgcctcaggtgtggtgaggaatttgggatattcccaaagc
tcccgttcctctacctcgggaggagaattccagagttga
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