Cinclus cinclus (white-throated dipper): 134055881
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Entry
134055881 CDS
T10813
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134055881 (RNF40)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134055881 (RNF40)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
134055881 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
134055881
NCBI-ProteinID:
XP_062368335
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All DBs
Position
36:complement(766905..804152)
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AA seq
903 aa
AA seq
DB search
MGILGVKMLDSEVQALLRRCDGDGGGAGGGGGAAPPPGDPPGDPPEPPPDPPGDPERTEP
WAGPEEGVAAAPPPPRLSFAPEAVARLGGALGRVQRGLQHLGTHLSARAELAEPGRELLR
ELLREHRRLQELTQHLHEKHQREALELAELQDKASSAETKVLEMGTTLEGLQWDSAKLRK
REGRLDRHLAEALEQLTSGSYGSGSSGGFQGGQITLSMQKFEMLNAELEGNQDLANSRMA
ELEKLQLELQAAVRGQERLKVALRSLPEEAVKEALEYKVLQSQFSLLYHESLQVKTQLDE
ARALLLATKNSHLRHIEHMESDELGVQKRLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLA
ANEQAGPINREMRHLISSLQNHNHQLKGDVQRYKRKLREVQAEIGKLRLQASGAPPPPSP
APPPPPPTSSSSSSGPSPSSSSAAPPEETPPPTPAPPPSDDKEGVAASGPAPSSQDPPPK
SAPPPLKEEEEEAIPGPSPTPNPAPQPQPRPHPKEPPPAPPPPRPRPPGGRGEGRERPKG
AGPEEGKKKDSEVLKQLRAELKKAQENQKEMKLLLDMYKSAPKEQRDKVTLMAAERKSKA
ELEELRLRWRELEERERRESKKLADEEALRRLRLSEEQIEHLQRRLAATKQEEEALLSEM
DVTGQAFEDMQEQNLRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELAEQVLALK
AQVEAQLQVVQKLEEKERGLQSALGAVEKELSLRSQALELHKRKAVEAAQLAEDLRAQGE
HVQARLRELQVCAAENRAAKDKESLSLKRAQEELSRLRRKLEKQRKVEVYADADQILQEE
IKEYRARLTCPCCNARKKDAVLTKCFHVFCFECVKSRYDTRQRKCPKCNAAFGAHDFHRV
YIS
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggggattttgggggtgaaaatgctggactccgaggtccaggccctgctccgtcgctgc
gatggggacgggggaggggccgggggtgggggaggggcggcccctccccccggggacccc
cccggggacccccccgagccccccccggacccccccggggaccccgagaggacagagccg
tgggcggggcccgaggagggcgtggccgccgcccctcccccccccaggctgagcttcgcc
cccgaggccgtggccaggttggggggggccctgggcagggtccagagggggctgcagcac
ctggggacgcacctgagcgccagggcggagctggcggagcccgggcgggagctgctgcgg
gagctgctgcgggagcaccggcggctgcaggagctgactcagcacctgcacgagaaacac
cagagggaggcgctggagctggcggagctgcaggacaaggccagctcagcagagacgaag
gttctggagatggggacgacgctggaggggctgcagtgggacagcgccaaactgcgcaag
agggagggcaggctggacaggcacctggctgaggcactggagcagctcacctcaggctcc
tacggctccggcagctccgggggtttccaggggggtcagatcaccctgagcatgcagaag
tttgagatgctgaacgcggagctggaggggaaccaggacttggccaattcccgcatggcc
gagctggagaagctgcagctggagctgcaggcggcggtcaggggacaggaacggctcaag
gtggctctgcgctcactccctgaggaggccgtgaaggaggctctggagtacaaggtgctg
cagtcccagttctcgctgctctaccacgagagcctccaggtgaagacgcagctggacgag
gcgcgggcgctgctgctggccaccaagaacagccacctgcgccacatcgagcacatggag
agtgacgagctgggggtgcagaagcggctccggaccgaggtgatccagctcgaggacacc
ttggcccaggtgcgcaaggagtacgagatgctgcgcatcgaattcgagcagaacctggcg
gccaacgagcaggcaggccccattaaccgggagatgcgtcacctgatcagttccctgcag
aaccacaatcaccagctcaagggggacgtgcagcgctacaagcgcaaactgcgcgaggtg
caggccgagatcggcaagctccgcctccaggccagcggtgcccctcccccacccagccca
gcccctcccccaccccctcccacatcttcttcctcctcctcaggcccctccccctcctca
agctctgccgctcccccagaagaaacccctccccccaccccggcccctcccccttccgac
gacaaggagggtgtggccgcttccggccccgccccttcctcccaagaccctccccctaaa
tctgcccctccccctttaaaagaggaagaggaagaagcgatccccggcccctcccccacc
ccgaaccccgccccccaacctcagccacgcccccaccccaaggagccgcccccggccccg
ccccctcccaggccccgcccccctggggggcggggggaggggcgagagcggcccaagggg
gcggggcctgaggaggggaagaagaaagactcggaggtgctgaagcagctgagggcggag
ctcaagaaggcgcaggagaaccagaaggagatgaagctgctgctggacatgtacaaatcg
gcgcccaaggagcagcgcgacaaggtgacgctgatggcggccgagaggaagagcaaggcc
gagctggaggagctgcggctgcgctggcgggagctggaggagcgcgagcggcgcgagagc
aagaagctggcggacgaggaggcgctgaggcggctgcggctgagcgaggagcagatcgag
cacctgcagcgacggctggcggccaccaaacaggaggaggaggcgctgctgtcggagatg
gacgtgacgggccaggccttcgaggacatgcaggagcagaacctgcggctgctgcagcag
ctgcgcgagaaggacgacgccaacttcaagctgatgtcggagcggatcaaggccaaccag
atccacaaattactgcgagaggagaaggacgagctggccgagcaggtgctggccctcaag
gcgcaggtggaggcgcagctgcaggtggtgcagaagctggaggagaaggagcggggcctg
cagagcgccctgggggccgtggagaaggagctgagcctgcgctcgcaggcgctggagctg
cacaagaggaaggccgtggaagccgcccagctggccgaggacctgcgggctcagggcgag
cacgtgcaggcgcggctccgggagctgcaggtgtgcgcggccgagaaccgagcggccaag
gacaaggaatcgctgagcctcaagagggcgcaggaggagctgtcgcggctgcgccggaag
ctggagaagcaacgcaaggtcgaggtttacgccgacgccgaccagatcctgcaggaggag
atcaaggagtaccgggcccgtctgacgtgtccgtgctgcaacgcccgcaagaaggacgcg
gtgctgaccaagtgcttccacgtcttctgcttcgagtgcgtcaagagccgctacgacacg
aggcagcgcaagtgccccaagtgcaacgcggccttcggcgcccacgacttccaccgcgtc
tacatcagctga
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