Cinclus cinclus (white-throated dipper): 134055888
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Entry
134055888 CDS
T10813
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134055888
NCBI-ProteinID:
XP_062368341
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Position
2:21167390..21171345
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AA seq
739 aa
AA seq
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MAMLLFPVQLLAVASTVYLELVRSAQGGAYYGIKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHLGKEVPHMPYGKEYPHLPQYRKEVPQMPMIGKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGIPGIPGPKGEKGV
GIPGLPGLKGPPGLPGAPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGPPGIGKPGQDGMPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPLGPKGEKGHAGPPGMGGPPGEPGRPGLPGIMGPPGAAGFPGPKGEGGAVGPPGPV
GPKGEPGLQGFPGKPGFPGEVGGPGLRGLPGPIGPKGEAGHKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGMPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVLIPPTPPAVGQYLPEVGPGIEGVKPPYGYKGKK
GKAGGVVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGIYYFAY
HVHCKGANVWVALYKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgctcttccctgtgcagctgctggcagtggcttccactgtttatctagaa
ctggtgaggtctgctcaaggaggtgcctactatgggatcaagcagctgccacctcaggtg
ccccagtaccagccccttggacaacaagtacctcacatgccgctgggcaaagaaggcatc
ccgatgcagcacctgggcaaggaggtgccccacatgccctatgggaaggagtacccccat
ctgccccagtacaggaaggaggtcccgcagatgcccatgattggcaaggatatggctccc
aagaaagagaaagaaattcccatgcgcagtctgaggggtgaacaaggccccccaggtgaa
cctggaccaagagggccaccagggccaccaggattaccaggtcatggtgtaccaggagcc
aaaggaaaaccaggcccacaaggatacccaggaattggaaagccaggtttgccagggatg
ccaggaaaaccaggagtcatggggcccccagggccaagaggagagatggggccgaagggg
gagattgggcccatggggatacctggaccgcaaggaccaccagggcctcatgggcttccc
ggcatagggaaagcaggtgctccagggctacaagggcaaccagggccaaagggtgagcct
gggatgaaggggccaccaggaatacctggaatcccaggcccaaaaggggagaagggtgtc
gggatcccaggtttgccgggtctgaagggtccacctgggctgcctggtgcacctggcccc
gtggggctgccgggggttggcaaaccaggcatggttggcttccctggcccacagggaccc
ctgggcaaacccggacccccaggagagttagggctgcaggggcctccaggggcccctggg
atccagggccctcctggtccacctggcattggcaaaccaggccaggacggtatgcctggc
cagcccggcttcccgggtggcaaaggggagcagggactcccaggcctgccagggccccct
ggcctacctggggttgggaagccaggctttcctgggcccaaaggggagcgaggtgtgggt
ggtctgcctggtcccctgggcccaaaaggggagaaggggcacgcggggccacctggcatg
ggagggccaccaggggagcctggccggccaggactgccgggcatcatgggccccccgggg
gctgccggtttcccaggacctaaaggggaggggggtgccgtagggccaccaggaccagtg
ggccccaaaggagaacctggcctgcagggttttccaggaaagccaggctttcctggggaa
gtgggtggtcctggcctgcgggggctgccgggccccataggacccaaaggggaagccgga
cacaaaggcttgccggggctgccgggtgtcccagggcttgtggggccaaagggtgagccc
gggctccccggtgcccaggggcttcagggcccctcaggcatcccgggcattgcgggaccc
agtggtcccatcggccctcccgggctgccaggggccaagggcgagccaggcatgcccggc
ccccccggcttccctggggtaggcaaacctggcgctgcagggctgcagggacccccggga
aagcctggggcgcttggtcctcctggccagccgggacttcaggggccaccgggccccccc
gggcccccggggcccccagtcctcatcccacccactccaccagccgtgggacagtacctg
cctgaggtggggccagggatagagggcgtgaagcctccatacggctacaagggcaagaaa
ggcaaggctggcggcgttgtctacgagatgcccgctttcacggcagagctcctcacgccc
ttcccccgcgtcggggtgcccgtgaagttcgacaagcttctgtacaatggccgacagaac
tacaacccccagacgggcatcttcacctgcgagatccccggcatctactactttgcctac
cacgtccactgtaaaggcgccaacgtgtgggtggctctgtacaagaacaacgagccgctc
atgtatacctatgacgagtacaagaagggcttcctagaccaggcttcgggaagtgctgtg
gtgcagctgatgcacggagacaaggtttacgttcagatgccatccgagcaggcggcagga
ctctatgccgggcagtatgttcattcgtctttttcagggtatttattgtatcccatgtaa
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