Cinclus cinclus (white-throated dipper): 134056059
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Entry
134056059 CDS
T10813
Symbol
MYBPC2
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-binding protein C, fast-type
KO
K12558
myosin-binding protein C, fast-type
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134056059 (MYBPC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccic04812
]
134056059 (MYBPC2)
Cytoskeleton proteins [BR:
ccic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134056059 (MYBPC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycogen_syn
I-set
Ig_3
fn3
Ig_2
ig
THB
V-set
FN3_DSCAM-DSCAML_C
Ig_RIMBP2
Glyco_transf_5
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
134056059
NCBI-ProteinID:
XP_062368541
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All DBs
Position
38:367309..433528
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AA seq
1614 aa
AA seq
DB search
MPLARSVSVSSLPGLEDWGGPGAPDNVVLFEVAWEVANKVGGIYTVLQTKARVTADEWGE
SYVLVGPYVESSVRTQVELLEPPQPALRRTLAAMNAQGCKVHFGRWLIEGSPAVVLLDVG
ATAWSLERWKGELWESCAIGVPWYDREANDAVLFGFLVAWFLGEFAAQSEERPFIVGHFH
EWLAGLGLVLSRARRLPVATIFTTHATLLGRYLCAGSVDFYNNLHSFDVDKEAGERQIYH
RYCLERAAAHCAHVLTTVSHVTAAEAEHLLKRKPDLVTPNGLNVRKFSAMHEFQNLHAQS
KARVQEFVRGHFYGHLDFDLDKTLFFFIAGRYEFSNKGADIFLEALARLNYLLRVNGSEV
TVVAFFIMPARTNNFNVESLKGQAVRKQLWDTANAVKEKFGKKLYESLLVGNLPDMNKML
DREDFTMMKRAIFATQRQSFPPVCTHNMLDDATDPILTTIRRIGLFNSSNDRVKIIFHPE
FLSSTSPLLPVDYEEFVRGCHLGVFPPTTNPXGYTPAECTVMGIPSVSTNLSGFGCFMEE
HIADPSAYGIYIVDRRFRAPEESCAQLTAFLYGFCQQSRRQRIVQRNRTERLSDLLDWKY
LGRVRGGPGGAWGSLGVILGAGRPSGSENLLQTFKRTDDSKDESAGELDFSGLLKKREEQ
AEEVRKKKKDDEEDTIPPEIWELLKGVTKKSEYERIAFQYGITDLRGMLKRLKKIKVEPK
KSEAFIRKLDPAYQVDKGNKIRLMVELSNPDLPLKWYKNGQLIKPSNKYVFENVGLKRIL
TINKCSLADDAAYECRVNDEKCFTEVFVKEPPVTIVKGPEDQQVVVGERVVLEAEVSEEG
AQVMWTKDGVELTREETFKYRFKKDGRKHFLILNEATRDDTGRYRILTNGGEAEAEVIVE
EKQLEVLQGIADLTVQAAEQAVFKCEVSDEKVTGRWFKNGVEVRPSKRIHISHTGRIHKL
VIDDVRPEDEGDYTFVPDGFALTLSAKLNFLEIKVEYVPKQEPPKIHLDCSGRDTENTLV
VVAGNKLRLDVPISGEPLPTVTWTKDGQEFTVKEGRVRLEEKHELSSLVIESAERGDEGR
YQIRVTNPAGEDTAAITIRVVDVPDPPEAVRVTSVGEDWAVLVWEPPKFDGGQPVTGYLV
ERKKKGSMRWMKLNFEVLPALTFESTRMIEGVLYEMRVFAVNAIGVSAPSLNTPPFMPIA
PTSEPTHLVLEDVTDTTATLKWRPPERLGAGGIDGYLVEWCREGDSTWTPANTELVERCG
LTVRGLPTGEKLLFRVVGVNIAGRSPPATMAQPVTIREIVERPKIRLPRHLRQTYVRKVG
EQVNLVIPFQGKPRPQVTWTKEGAPLGEDVHVRTSDRDTVFFIRAAARGHSGRYGLSVRI
EGMEDTAEMRLRIVEKPGPPRKVQVKEVWGFNALVEWEPPEDDGNAEITGYTIMKADKRT
MEWFTVYEHNRPLRCTASELVMGNEYLFKVFSENLCGLSEKPALSCNTAVIPKAELRLKP
PQYQEHDFRSAPQFLTPLVDRSAVAGYSTALNCAVRGHPKPKVVWLKNQVAIGEDPKFLA
RHSQGVLTLLIRKPGPFDGGTYTCRAINELGEALTECRLEIRGEPPPPPQKKKK
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggcccgcagtgtgtccgtgagttccctgccggggctggaggactgggggggt
cccggcgcccccgataacgtcgtgctctttgaggtggcctgggaggtggccaacaaagtg
ggggggatctacacggtgctgcagacgaaggctcgggtgacggccgatgagtggggtgag
agctacgtgctggtggggccctacgtggagagcagcgtccgcacccaggtggagctgctg
gagcccccccagcccgccctgcgccgcaccttggctgccatgaacgcccagggctgcaag
gtgcattttgggcgctggctgatcgagggcagcccggccgtggtgctgctcgacgtcggg
gccacggcctggagcctcgagcgctggaagggcgagctctgggagagctgcgccatcggc
gtgccctggtacgaccgcgaggccaacgacgccgtcctcttcggcttcctcgtcgcctgg
ttccttggagagtttgcggcgcagagcgaggagcggccgttcatcgtgggccatttccac
gagtggctggcagggctggggctggtgctgagccgcgcccgccgcttgcccgtggccacc
atcttcaccacgcacgccaccctgctgggccggtacctgtgcgccgggagcgtggacttc
tacaacaacctgcacagcttcgacgtggacaaggaggcaggtgagcgccagatctaccac
cggtactgcctggagcgcgcggccgcgcactgcgcccacgtgctcaccaccgtgtcccac
gtcaccgccgccgaggccgagcacctgctcaagcgcaagccagacctggtgacccccaac
gggctgaacgtgcgcaagttctcggccatgcacgagttccagaacctgcacgcccagagc
aaggcccgggtccaggagttcgtccggggacacttctacggacacctggatttcgacctg
gacaagactcttttctttttcatcgccggccgctacgagttctccaacaaaggcgccgac
atcttcctggaggcgctggccaggctcaactacctgctgagggtgaatggcagcgaggtg
accgtggtggcatttttcatcatgccagccaggaccaacaacttcaacgtggagtcgctc
aagggccaggctgtgcgcaagcagctctgggacacggcgaacgccgtgaaggagaaattt
gggaagaaactctacgagtctctgctggtggggaacctcccggacatgaacaagatgctg
gacagggaggatttcaccatgatgaaaagggcgatcttcgccacgcagcgccagtcgttc
ccccccgtgtgcacccacaacatgctggacgacgccaccgaccccatcctgaccacgatc
cgcaggatcggcctcttcaacagcagcaacgacagggtcaagatcatcttccaccccgag
ttcctgtcctccaccagccccctcctgcccgtggactacgaggaatttgtccggggttgc
cacctgggggtcttccctcctactacgaaccctnngggctacaccccagccgagtgcacg
gtcatgggcatccccagtgtctccaccaacctgtcggggttcggctgcttcatggaggag
cacatcgctgacccctcggcctatgggatctacatcgtggaccggcggttccgagccccg
gaggagtcgtgcgctcagctcacggcgttcctgtacggcttctgccagcagagccggcgg
cagcgcatcgtgcagcgcaaccgcaccgagcgcctgtccgacctgctggactggaaatac
ctgggcagggtgagggggggcccggggggcgcctgggggtcactgggagtcattctgggg
gccgggcgcccctcgggatcggagaatttgctccagaccttcaagaggacggatgactcc
aaggatgaatcggccggagagctcgacttcagtgggctcctgaaaaagagggaggagcag
gcggaggaggtgaggaagaagaagaaggacgatgaagaagacacgatcccgcccgagatc
tgggagctgctcaaaggcgtcaccaagaagagcgagtacgagagaatcgccttccagtac
ggcatcaccgacctgcgcggcatgctgaaacggctcaagaagatcaaggtggagcccaag
aagagcgaagccttcatccggaagttggaccccgcctaccaggtggacaaagggaacaag
atccggctgatggtggagctcagcaaccccgacctgcccctcaagtggtacaagaacggg
cagctcatcaaacccagcaacaagtacgtgttcgagaacgtgggcctcaagcgcatcctg
accatcaacaagtgctcgctggccgacgacgccgcgtacgagtgccgggtgaacgacgag
aaatgcttcaccgaggtcttcgtcaaggagccgccggtgaccatcgtgaagggccccgag
gaccagcaggtggtggtgggggagcgcgtggtgctggaggccgaggtgtccgaggagggg
gcgcaggtcatgtggacgaaggacggcgtggagctgacccgcgaggagacgttcaagtac
cgcttcaagaaggacggacggaaacatttcctgatcctgaacgaggccacgcgggacgac
accgggcgctaccgaatcctgaccaacggaggggaggcggaggccgaggtcatcgtggaa
gagaagcagctggaggtgctgcagggcatcgcggacctgacggtgcaggcggccgagcag
gccgtgttcaagtgcgaggtttcggacgagaaggtcaccgggcgctggttcaagaacggc
gtcgaggtccggcccagcaaacgcatccacatctcccacaccggcaggatccacaagctg
gtgatcgatgacgtgcgccccgaggatgagggcgattacaccttcgtacctgacggcttc
gccctcaccctgtcagccaagctcaacttcctcgagatcaaggtggagtacgtgcccaaa
caagagccccccaaaatccacctggactgctcggggcgggacacggagaacacgctggtg
gtggtggcagggaacaaactgcggctggacgtgcccatctcgggagagccgctgcccacc
gtcacctggaccaaggacgggcaggagttcacggtgaaggagggccgggtgcggctggag
gagaagcacgagctcagcagtttggtgatcgagagcgccgagcgcggcgacgaggggcgg
taccagatccgcgtcaccaaccccgcgggggaggacacggccgccatcaccatccgcgtc
gtggacgtccccgatccccccgaggccgtccgggtcacctcggtgggcgaggactgggct
gtgctggtctgggagccccccaagttcgacggggggcagccggtcacaggttacctggtg
gagaggaagaagaagggctccatgcggtggatgaagctcaacttcgaggtgttacctgcg
ctcaccttcgagtccacgcgcatgatcgagggcgtgctctacgagatgagggtgttcgcc
gtcaacgccatcggggtctcggcccccagcctcaacaccccccccttcatgcccatcgcc
cccacgagcgaacccacccacctggtgctggaggacgtgacggacacgacggcgaccctg
aagtggcgcccacctgagcgcctgggggcggggggcatcgacggttacctggtggagtgg
tgccgggaaggggactccacctggacccccgcgaacacggagctcgtggagcgctgcggg
ctcacggtgcgggggctgcccacgggagagaagctcctgttccgagtggtgggagtgaac
atcgcgggccgcagccccccggccaccatggcccagcccgtgaccatccgagagatcgtc
gagcgccccaaaattcggctgccccggcacctgcggcaaacgtacgtgaggaaggtgggg
gagcaggtgaacctggtgatcccgttccagggcaagccccgcccccaggtgacgtggacg
aaggagggcgcgccgctgggcgaggacgtgcacgtgcgcacgtcggaccgcgacacggtg
ttcttcatccgcgccgccgccagggggcactcggggcgctacgggctcagcgtgcgcatc
gagggcatggaggacacggccgagatgcgcctgcgcatcgtcgagaagccgggacccccc
cggaaggtgcaggtgaaggaagtttgggggttcaacgccctggtggagtgggagcccccc
gaggacgacggcaacgccgaaatcaccgggtacaccatcatgaaggccgacaagagaacc
atggagtggttcacggtgtacgaacacaaccggcccctgcgctgcacggcctcggagctg
gtgatgggcaacgagtacctgttcaaggtgttcagcgagaacctgtgcgggctgagcgag
aaacccgcgctgtcctgcaacaccgctgtcatccccaaagcggagctgaggctgaagccc
ccccagtaccaggagcacgattttcgctcggccccccaatttttgacacccctggtggac
aggagcgccgtggccggatactccaccgccctcaactgcgccgtgagggggcaccccaag
cctaaggtggtttggctgaagaaccaggtggccattggagaggaccccaaattccttgcc
cggcatagccagggggtcttgaccctcctcatccgcaagccgggacccttcgatggtggc
acctacacctgccgtgccatcaacgagctgggggaagccctgaccgagtgtcggctggag
attcggggtgagccccccccccccccccaaaaaaaaaaaaaataa
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