Cinclus cinclus (white-throated dipper): 134056063
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Entry
134056063 CDS
T10813
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134056063 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccic04515
]
134056063 (LRRC4B)
Cell adhesion molecules [BR:
ccic04515
]
Immunoglobulin superfamily
NGL family
134056063 (LRRC4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
LRRNT
Ig_2
LRR_R13L1-DRL21
DUF7617
Motif
Other DBs
NCBI-GeneID:
134056063
NCBI-ProteinID:
XP_062368544
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All DBs
Position
38:513885..516619
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AA seq
665 aa
AA seq
DB search
MARPPHLRRWWPPAPPRPPLLLLLLAAVPWLPAAPASSPSPCPAACTCSNQASRVICTRR
ELLEVPQSISVNTRYLNLQENHIQVIRTDTFKHLRHLEILQLSRNLVRKVEVGAFNGLPN
LNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRL
EYISEAAFEGLVNLRYLNLGMCNLKEIPNLTALVRLEELELSGNRLGRVRPGSFQGLGSL
RKLWLMHARVAAVERNAFDDLKALEELNLAHNDLASLPHDLFAPLHRLERVHLHHNPWRC
DCDVLWLSWWLRETVPSNTSCCARCHAPPALRGRYLGELEPGHFTCYAPVIVEPPADLNV
TEGMAAELKCRTGTAMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYT
CMVTNAAGNTTATATLNVSAADAAAAAAAAAAAATGYTYFTTVTVETTEGAGGDEQTPQT
PAAPTAAGWEPAGASTAAPATRATGKPFTVPVTAAAGAAAAGGGGLQDLDDVLKTTKIII
GCFVAITFMAAVMLVAFYKLRKQHQRHKHRGGPARAVEIVNVEDELAGGTGGAGGGSGNA
GVGGDNRLALPALEREHLDRYAALAAHYGGPAAALGCGKTPLLNSVHEPLLFKSPSKENV
QETQI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggccacctcacctgcggcgctggtggcccccggctcctccccggcctcctctc
ctcctgctcctgctcgccgccgtcccttggctgccggccgcgccggcctcctcgcccagc
ccgtgcccggccgcctgcacctgcagcaaccaggccagccgcgtcatctgcacgcggcgc
gagctgctggaggtgccgcagagcatctcggtgaacacgcgctacctgaacctgcaggag
aaccacatccaggtgatccgcaccgacaccttcaagcacctgcggcacctggagatcctg
cagctcagccgcaacctggtgcgcaaggtggaggtgggcgccttcaacgggctgcccaac
ctgaacacgctggagctcttcgacaaccggctgaccacggtgcccacgcaggccttcgag
tacctgtccaagctgcgggagctgtggctgaggaacaaccccatcgagagcatccccagc
tacgccttcaaccgcgtgccctcgctgcgccgcctcgacctgggcgagctcaagcgcctc
gagtacatctccgaggccgccttcgagggcctggtgaacctgcgttacctcaacctgggc
atgtgcaacctcaaggagatccccaacctgacggcgctggtgaggctggaggagctggag
ctgtccgggaaccgcctgggccgggtgcggccgggctccttccagggcctgggcagcctg
aggaagctgtggctgatgcacgcgcgcgtggcggccgtcgagaggaacgccttcgacgac
ctgaaggcgctggaggagctgaacttggctcacaacgacctggcctcgctccctcacgac
ctgttcgcccccctgcaccgcctggagcgcgtccacctgcaccacaacccctggcgctgc
gactgcgacgtgctctggctcagctggtggctccgcgagaccgtgcccagcaacaccagc
tgctgcgcccggtgccacgcgccgcccgcgctgcgcggccgctacctgggcgagctggag
cccggccacttcacctgctacgctccggtcatcgtggagccgccggcggacctcaacgtc
accgagggcatggcggccgagctgaagtgccgcacgggcacggccatgacgtcggtgaat
tggctgacgcccaacgggacgctgatgacgcacggctcgtaccgcgtgcgcatctcggtg
ctgcacgacggaacgctcaacttcaccaacgtcaccgtgcaggacacgggccagtacacc
tgtatggtcaccaacgccgccggcaacaccacggccaccgccacgctcaacgtctcggcc
gccgacgccgccgcagccgccgccgccgccgccgccgcggccaccggttacacctatttc
accacggtcaccgtggaaaccaccgaaggcgccggaggcgacgaacaaaccccccagacc
cccgcggcgcccacggcggccggctgggaaccggccggcgcctccacggccgctccggcc
actcgcgccaccggcaaacccttcaccgtccccgtcaccgccgccgccggcgccgccgcc
gccggcgggggaggcctccaagatttggacgacgtcttgaagaccaccaagatcatcatc
ggttgcttcgtggccatcaccttcatggccgccgtcatgctggtggctttctacaagctc
cgcaagcagcaccagcgccacaagcaccgcggcggccccgcgcgcgccgtcgagatcgtc
aacgtcgaggacgagctggccggaggaaccggcggcgccggaggaggttccggcaacgcc
ggcgtcggaggggacaaccgtttggcgttgccggcgttggagagggagcacctggacagg
tacgcggcgttggccgcgcattacggcgggccggcggcggcgttgggctgcgggaagacg
ccgctgctcaactcggtgcacgagccgctgttgttcaagagcccttccaaggagaacgtg
caggagacgcagatttga
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