KEGG   Cinclus cinclus (white-throated dipper): 134056073
Entry
134056073         CDS       T10813                                 
Symbol
PNKP
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
ccic  Cinclus cinclus (white-throated dipper)
Pathway
ccic03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    134056073 (PNKP)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccic01009]
    134056073 (PNKP)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccic03400]
    134056073 (PNKP)
Enzymes [BR:ccic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     134056073 (PNKP)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     134056073 (PNKP)
Protein phosphatases and associated proteins [BR:ccic01009]
 HAD phosphatases
  Other HAD phosphatases
   134056073 (PNKP)
DNA repair and recombination proteins [BR:ccic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     134056073 (PNKP)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 Hydrolase_6 HAD
Other DBs
NCBI-GeneID: 134056073
NCBI-ProteinID: XP_062368556
LinkDB
Position
38:343818..354973
AA seq 504 aa
MRAELRGLAGPVPLPDGQPVVLGRGPLTGVTDRKCSRQQVEIVANYTEGTAQVTQLGVNP
SSVGGSVLGRGGCGTLTPGQTLLLVNGRYPLVLHFEGSPHPKKRPASPPEEPPPARRTPP
SPSQGGWKKLGSLLILTPSGVRPSTKVAGFDLDGTLITTRSGKVFPTSPDDWRILYPEIP
KKLKQLQNEGYKLVVFTNQLGISRGRLRPEVFQAKVEAVTQQLGVALQVLVATGPGIYRK
PVLGMWDHLCEKANGDVTVSVPDSFYVGDAAGRPPNWAPGRKKKDFSCSDRLFALNAGLR
FLTPEEEFLGWAPAPFDLPAFDPRPLDTKVPPELPRDELVSDKPEVLLTVGFPGAGKSTF
VKRHLIPAGYEYVNRDTLGSWQRCVSACSAALARGRPVVVDNTNPDPESRQRFVSCAREA
AVPCRCLQFTASLEQARHNCRFRDMTQSGHVPVTDAVLFGYKKHFVTPDLSEGFSQILQI
PFVPHFGDPPDPQRRRLFFQFSDG
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgcgggccgagctgcggggcctcgccgggcccgtgccgctgcccgacgggcagcccgtg
gtgctgggccgcgggccgctcaccggcgtcaccgaccgcaagtgctcccggcagcaggtg
gagatcgtggccaactacaccgagggcacggcccaggtcacacagcttggggtgaacccc
agttcggtgggggggtccgtgctgggccgggggggctgcgggaccctcacccccgggcag
accctgctgctggtgaacgggaggtaccccctggtcctgcacttcgaggggtccccccac
cccaaaaaacgccctgcaagcccccccgaggagcccccccccgcccgcagaacccccccc
agcccctcccagggtgggtggaagaagctcggatccctcctcatcctcaccccctcaggg
gtccggcccagcacgaaggtcgccgggtttgacctggatgggaccctcatcaccacccgc
tctgggaaggtgtttcccaccagccctgatgattggaggattttgtatcccgagattccc
aaaaagctgaaacagctgcagaatgaggggtataagctcgtggtgttcaccaaccagttg
gggatctcccggggccggctgcgccccgaggtgttccaggccaaggtggaggcggtgacg
cagcaactcggggtggccctgcaggtgctggtggccacggggccagggatctacaggaaa
ccagtgctgggaatgtgggatcacctgtgtgagaaggcgaacggggacgtgacggtgtcg
gtgcccgacagtttctacgtgggggacgctgccggacgccccccaaactgggcgccaggg
aggaagaaaaaggatttctcctgcagcgaccgattgttcgctctcaacgcggggctgcgg
ttcctgactcctgaggaagagttcctgggctgggccccagcgccctttgacctcccagcc
ttcgacccccgtcccctggacaccaaagtccccccggaactccccagggatgaactggtg
tcggacaagcctgaggtgctgctgaccgttggcttccctggggctggcaaatccaccttt
gtgaagcgacacctgatccctgcaggatacgaatacgtgaacagggacacgctgggctcg
tggcagcgctgcgtctccgcctgttcggccgccctggctcggggccgccccgttgtcgtc
gacaacaccaaccctgaccccgaatcgcggcaaaggtttgtgtcctgtgcccgggaggcc
gcggtgccgtgtcggtgtctccagttcactgcgagtctggagcaggcacggcacaactgc
aggttccgggatatgacgcagagcggccacgtccccgtcaccgacgctgtcctgttcggc
tacaagaaacactttgtgacacccgacctctccgaaggcttctcccaaatcctccagatc
cccttcgtgccccattttggggaccccccagacccacaacgaaggcgcctcttcttccaa
tttagcgatgggtga

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