Cinclus cinclus (white-throated dipper): 134056116
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Entry
134056116 CDS
T10813
Symbol
SMC2
Name
(RefSeq) structural maintenance of chromosomes protein 2
KO
K06674
structural maintenance of chromosome 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134056116 (SMC2)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
134056116 (SMC2)
Condensin II
134056116 (SMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
134056116
NCBI-ProteinID:
XP_062368649
LinkDB
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Position
Z:complement(32900039..32920150)
Genome browser
AA seq
1186 aa
AA seq
DB search
MYIKSIVLEGFKSYAQRTEIHDFDPLFNAITGLNGSGKSNILDSICFVLGISNLSQVRAS
NLQDLVYKSGQAGITKATVSINFDNKDKSQSPLGFEANDEIIVTRQVVVGGRSKYLINGV
NAANSRVQDLFCSVGLNVNNPHFLIMQGQITKVLNMKPPEILAMIEEAAGTRMYECKKIA
VQKTIEKKESKLQSIQTVLNEEISPTLHKLKEERASYLEYQKLVRETEHLSRFCIAYQFV
LAEETKVSSTVMLNKMQSNVKKFLESRTEIQEKVKQLNEDIAEMEKKKDKEVGGRLQALE
AALSENQRVNTKALSALDLKKQNLKSEEVKYNELVTRMQKDSKALVSKEKEVKNLEKELN
VLLEESEKDAHALAAAQQHFNAVSAGLSSNKDGEEATLSGQMMICKNEISKAETEAKQAR
MKLSYAQKELKAKEAEVKKMDEGYKKDQKAFEAVEQKKRTLEKQIKELNYSEEKGEALLA
KRKALVSDISRLRELSENLMAKFPHLQFTYKHPEKNWDLNHVKGPVVSLFTVKNLSNAKA
LEAVAGGKLYNIIVDTEVTGKKLLEKGELKHRYTIIPLNKISARCVQEDTVKLAQSLAGH
ANLHLALSLIVYESELQKAMEYVFGTTLVCNNMDNAKKVTFDKRIMTRSVTLDGDVFDPQ
GTLHGGASSQATPILSKLQEMKAVEVELKKKESELAAVENELASLKTVAGKYQQLKQQWE
MKSEEAELLHKKLQQSAYHKQEEELLALRKTIAHCEETLSNTEESKKKAEKNYKELENKI
KNAEAESLKERKNAEQKLDNAKKKADTSSKKIKDKQQEVKALVLELEELKQEQASYEQQI
TAAEGAIKSYKDQIEAMVAEVSKTQESVERAQKELAKQKEVIALHDNVIKEKSAEMVKYR
EQNNELQLKIKELEHSITKCQQEAADAADKVAKMLKEHKWIASDKPLFGQPNSAYDFKSS
SPKEAIQKLQKLQEHKEKVGRNVNMRAMNMLSDAEERYNDLMKKKRIVENDKMKILAVIE
ELDRKKKQALEIAWKKVNEDFGSIFSTLLPGARAMLAASKTHNVFVGMEFRVALGKTWKE
NLTELSGGQRSLVALSLILAMLLFRPAPVYILDEVDAALDLSHTQNIGQMLQTHFRHSQF
IVVSLKDGMFNNANVLYKTRFVDGISTIARYSQNQNRKKESPHKKS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagtccattgttcttgaaggttttaaatcttatgctcagagaacggaaatt
catgactttgacccgttatttaacgccattactggcttgaatggtagcggcaaatcaaat
atcttggactccatctgtttcgtcctgggaatcagcaatctctcacaggtgcgagcttcc
aacttgcaagatctagtttataagagtgggcaagctggaattacaaaggcaaccgtgtct
attaactttgataataaagacaagagtcaaagtccactgggatttgaagctaatgatgag
attattgtaactaggcaggttgttgttggaggtagaagtaagtatcttattaatggtgtg
aatgctgccaacagtcgtgtgcaggatctcttctgttccgttggactcaatgtcaataat
cctcacttcctcattatgcagggacaaattaccaaagttctaaatatgaagccaccagag
attttagccatgattgaagaagcagctggtactaggatgtatgagtgcaagaaaatagct
gtccagaaaaccatagagaagaaggaatccaaactgcaaagcattcaaacggtcttaaat
gaggagatcagtccaactttacataaactgaaagaggaacgagcatcctatctagaatac
caaaaattagtgcgagagacagaacatttaagccgcttttgtatagcttatcagtttgtt
ctggctgaagaaacaaaggtatcctccactgttatgctaaacaaaatgcaatctaatgta
aagaagtttctggaatcaaggactgaaattcaagagaaggtaaaacaacttaatgaagac
attgcagagatggaaaagaaaaaggataaggaagttggtggtagactccaggcactggaa
gctgctctttcagaaaatcaaagagttaatacaaaagcactaagtgctcttgatctcaag
aagcaaaacttaaaatctgaagaggttaagtacaatgaattggtaacacgtatgcagaag
gattcgaaagcattagtgtcaaaggagaaagaagtaaagaatctagagaaagaactaaat
gttttactggaagaaagtgaaaaagatgcacatgctttagctgcagcacaacagcacttt
aatgctgtgtctgctggcctgtccagcaataaggatggtgaagaagctactctttcagga
cagatgatgatctgcaaaaatgaaattagcaaagcagaaacagaggctaaacaggctcga
atgaaattgagttatgcacaaaaagaattaaaggcaaaagaagcagaagtcaaaaaaatg
gatgaaggctacaagaaagaccaaaaagcatttgaagccgttgaacaaaagaaaagaacc
ctagagaaacaaatcaaggagctgaactattcagaagagaaaggagaagccctcctagca
aaaaggaaggcattggtttctgatatcagccggctaagagaactgagtgaaaatttaatg
gcaaaatttcctcatctacaatttacatacaaacatccagagaaaaattgggatctaaac
catgtgaaaggccctgttgtgtctcttttcactgtgaaaaatctatccaatgccaaagcc
ctggaagcggtggccggagggaaactctataacattattgtggacacagaagttactggc
aaaaaactcttagaaaagggtgaactaaagcatcgatacaccatcattccattaaacaaa
atttcagccaggtgtgttcaagaagacacagtcaagttggcccaaagcttggctggacat
gctaatttgcatttagccctttctctaatcgtatatgaatctgaactgcagaaagcaatg
gaatatgtctttggaacaacactggtctgcaataacatggataatgctaagaaagtgact
ttcgacaaaagaataatgacaagaagtgttactcttgatggagatgtgtttgatccccaa
ggaactctgcatggaggtgcatcctcacaggctacaccaatattgtctaagcttcaagaa
atgaaagctgttgaagtagaactcaagaaaaaggaatctgaacttgcagctgtagagaat
gagttggcaagcttgaagacagttgctggaaagtaccagcaactgaagcagcagtgggag
atgaagtctgaggaagcagaactgttgcataagaagcttcagcaaagtgcttaccacaaa
caagaggaagagcttcttgccctgaggaaaaccattgcgcattgtgaagagacgttaagc
aatactgaagagagcaaaaagaaagcagaaaaaaattacaaggaattagagaataaaatt
aaaaacgcagaagcagagtctctaaaagaacgaaaaaatgcagagcagaaactggacaat
gctaagaaaaaggcagacacttcaagcaaaaaaataaaagacaagcaacaggaagtcaaa
gctttagttctggaactcgaagagctgaaacaagagcaggcctcctatgaacagcagata
acagctgcagaaggagcaatcaaatcctacaaggatcaaattgaggccatggtggctgaa
gtgtctaagacacaggaatctgtagagagagcacagaaggagcttgccaagcaaaaggaa
gtaattgcattacatgataatgtaattaaagaaaaatctgcagagatggtaaaatacaga
gaacaaaataatgaactgcagcttaaaattaaagaattagaacacagcatcaccaaatgt
caacaagaggctgctgatgctgctgacaaggtggccaaaatgctgaaagaacacaagtgg
atagcttcagacaagccactctttggccagccaaactcagcctatgatttcaaaagtagc
agccctaaagaagcaattcagaagctacagaaattgcaggagcataaagagaaagtggga
aggaatgtgaacatgagagctatgaacatgctttctgatgcagaggaaaggtacaatgac
ttaatgaagaaaaaaagaattgtagagaatgacaagatgaaaattcttgcagttattgaa
gagcttgaccggaagaaaaaacaagctctagaaattgcttggaaaaaggtgaatgaagac
tttggttccattttctcaacactcctacctggagccagagctatgctagcagcctccaaa
actcacaatgtttttgttggtatggagttcagggttgctttaggaaaaacctggaaggaa
aacttaacagaacttagtggaggacaaagatcattggtggccttatccttgatattagcc
atgctcctcttcaggcctgccccagtttacatcttggatgaagtggatgcagcccttgat
ctctctcatacccagaatattggacagatgcttcaaactcatttcagacactcccagttt
atcgtggtgtccttgaaggatggcatgttcaacaatgcaaatgtcctgtacaagaccaga
tttgtggatggtatatcaactattgcaagatacagtcaaaatcaaaacagaaaaaaagag
tctccgcacaagaaatcttag
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