Cinclus cinclus (white-throated dipper): 134056142
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Entry
134056142 CDS
T10813
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134056142 (TOPORS)
03036 Chromosome and associated proteins [BR:
ccic03036
]
134056142 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccic03037
]
134056142 (TOPORS)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134056142 (TOPORS)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134056142 (TOPORS)
UBL E3 ligases
134056142 (TOPORS)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
134056142 (TOPORS)
Cilium and associated proteins [BR:
ccic03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
134056142 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
PWI_Topors
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
134056142
NCBI-ProteinID:
XP_062368698
LinkDB
All DBs
Position
Z:33575070..33599765
Genome browser
AA seq
1046 aa
AA seq
DB search
MADPSRRLGESSRRRRPPGEERREPPGTGRCRTRHRLKSAAALARAGSEGPAVNMTSDKE
FAEDSNFSPKASTSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEWSKNKAE
CPLCKQPFFSIFHTIRAEDDFKEYILSPLETSSFASPDGRRFRYRTTLTRERRARSSPSR
RMLSSPDNGMLFEGLSSEPTRHRHREIQQMIRRLASRRKASAEGRSLRQIQEEDMINFRR
ALYRTGVRIRSIQDGGRYREISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLINIVQH
IIMSNVTRYDLESQAFADDIKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANYDCPAPS
YEEGSHSDSSIITISPDVAYPQGPDNSLSVPGLGQAPWDDETPGPSYSISEEVRATIASP
LESSESSDEDSVTGSRRAQLPTELQANADSNDSGSSSDNCVIVGYVKPLAERTPEVVELS
SDSEDSIKEERKEDVKKQRPVQHHSWSDSEPSRSFSPHSPTYREDVGICRSCLSPAVEKM
ESKEDEKNKCKRKDLPPQDLSWSPSPGSDTVCSPWNHRLSKKGRSRSPQSCSRDSRSSHG
HRSRREHHSKSQLKRRRSRSRDSSKHRRKRSSRRSRAHDSRTSLKSQKGSLSGESTPSRE
VSRSRSRSKGHSKRRSRSRDSDRYYVRDSYQSRHQWGSAFCSRKMFGDSYESSSRRRTRS
NTLYSRQSASPEYRIRSFIERTDLHSQRGLHERHYYCYERCRSRSRSSNRSRTPSGGTDR
MKSEKPGGKRKYKTRHLENAFMESTSLERENDSKKTSAKFSDCCRNEDSLSDNHASSETK
RKKRKKKMRSPSVEIVYEGKATDTMRHLKKKKKKHKKKHRKHHMSNSVHSSPVVITIDSD
SSKEPESTEWDSSITWTGATQINERENESPASFLRRTGCEETRGADNKCVIPATKENLDG
GVGNADVKLQETIADQSATTVNTHNNTSHTETVTSYVQEAPAAPSSQLPCPRTSFLECPE
GEPLILRLPKRLVDRSSWFDFPEEKM
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgtcccggcgcctgggggagagctcccgccgccgccgcccgccaggggag
gagcggcgggagccgcccggcaccgggcgctgccggacgcgccacaggctgaagtcggcc
gcggccctggcccgcgcgggaagcgagggcccggcggtgaacatgacctcagataaggag
tttgcagaagatagcaatttttcaccaaaagccagcaccagtaagctgccgacagatgca
tctcccgactccaagtgccccatctgcctggatagatttgacaacgttgcatatctagat
cgctgcttgcataggttctgcttccgctgtgtccaagaatggtcaaaaaacaaagcagaa
tgcccgctctgcaagcagccctttttttccattttccacacgattcgtgctgaagatgac
ttcaaggagtacatactcagccctttagaaaccagctcttttgccagccctgatggccgg
agatttcgttatcgcaccaccttaaccagggaacggcgcgcgcgcagttccccttcccga
aggatgctgtcctctccagataacgggatgttgtttgaagggctgtcaagcgagccaacg
cgacacaggcacagagagattcagcagatgatcaggaggctggcctcgaggagaaaggcg
agcgcagagggcagatctctgcgacagatccaggaggaggacatgatcaacttccgcagg
gctctgtaccgcactggcgtgcgcatccgcagcattcaggacggtggccgataccgagag
atttcggcagagttcttccgccgcaaccctgcttgccttcaccgcttggttccttggttg
aagcgggagcttacagtcctgtttggtgcccatggatctttgatcaatatcgtgcagcac
atcatcatgagtaacgtaactagatacgatctggaaagtcaggcctttgctgatgatata
aagccatttctgctgaatcggacagagcacttcctacatgaattcatcagttttgctcgt
tgtccttttaacttagaagcgtatgatcagcacgccaattatgactgtcctgcaccatca
tatgaggaaggaagccactcagactcatcaattattacaatatctccagacgtggcatac
ccacaagggccggataatagcttgtctgtgcctggccttggtcaggctccctgggatgat
gaaactccagggccttcctattccatttcagaagaggttcgtgcaaccatagcttctcct
ctggagtcatcagaaagttctgatgaggactctgttacagggagtagaagagcccaactg
ccaactgagttacaggctaatgctgactcaaacgacagtggctcttcctcagacaattgt
gtcattgttgggtatgtgaagccattagctgagaggacaccagaagtggttgagctgtcc
tctgactctgaggattccattaaagaggagagaaaggaagatgtcaagaagcagcgaccg
gtccagcatcacagctggagtgacagtgaaccaagcaggagcttctcaccacattcccca
acatatagggaggatgtaggaatttgtagaagctgtttatctcctgcagttgagaagatg
gaatcaaaagaggatgagaagaacaaatgtaaaagaaaagatctgcctccacaggacttg
agttggagcccctctccagggagtgacacagtatgctccccttggaatcaccgattgtct
aaaaagggaaggtccagaagcccacagtcctgttcacgggacagtcgaagcagtcatggc
catcggtctaggagggagcaccatagcaaaagccaacttaaaaggagacgatcgagaagc
agagatagtagcaaacataggaggaaaagaagcagcagaaggtcaagggctcatgacagc
agaacctctctgaaaagccagaagggctctctaagtggtgagagcactccatccagagaa
gtgagcagatcacgttcacgtagcaaaggccacagtaaaaggagatcaagaagtagagac
agtgatcgctattatgtaagagacagttaccaaagtagacaccagtggggttctgcattc
tgtagtagaaagatgtttggtgacagctatgaatcgtctagcagaaggaggacccggtct
aacactctttactcaaggcaatctgctagtccagagtacaggatacgatcatttattgag
aggacagatctgcatagccagaggggactccatgagagacactattactgttatgaaaga
tgcaggtcaaggagtcggtcaagcaacagatcaaggactccttctggaggaactgacaga
atgaaaagtgaaaagcctggtggaaaaaggaagtacaaaactcgccacctggagaatgca
ttcatggagagcacaagcctagaaagagaaaatgattccaagaaaacttccgcaaaattt
agtgactgctgtagaaatgaggatagcctgtcagacaatcatgcaagcagtgagacaaag
cgtaagaaaaggaagaagaaaatgaggagtccaagtgtggagatagtctacgaaggaaaa
gcaacagacacaatgaggcatcttaaaaagaaaaagaaaaagcataagaagaaacaccgg
aaacatcacatgagtaactcagtgcattcttctccagtggtgattacgattgatagtgat
agtagcaaggagccagaaagtactgaatgggacagcagtattacatggacaggggcaact
cagataaatgagagggaaaatgagtctccagcttcttttctgaggaggacaggatgtgaa
gaaactagaggagcagacaacaagtgtgttatccctgccacaaaggaaaacttagatggt
ggtgttggaaatgctgatgtcaaacttcaagaaacaatagctgatcagagtgctaccaca
gtgaatactcacaataacacctctcacacagaaactgtaaccagttatgttcaggaagca
ccagcagcgccttccagtcaactgccttgccccaggacttccttcttagagtgtccagag
ggagagccattgatactaagactgccaaagagacttgttgacagatcctcgtggtttgat
ttccctgaagaaaaaatgtag
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