Cinclus cinclus (white-throated dipper): 134056188
Help
Entry
134056188 CDS
T10813
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134056188 (DDX4)
Enzymes [BR:
ccic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134056188 (DDX4)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134056188 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
134056188
NCBI-ProteinID:
XP_062368794
LinkDB
All DBs
Position
Z:complement(68085058..68115189)
Genome browser
AA seq
675 aa
AA seq
DB search
MIEEDWNAEIGDEVLVPSLEKVSLLEKPNDPSSVFSQSVDSFGTDEFLDTQHQSVSSFGR
GRNFAAKGFQEGNEEDAFTQNRGFKGFGQGESFQERSSVDGASTQNRGFKGFRGGLGQGE
SFQEGNEEDAFTQNRGFKGFGQGESVGFQERSSVDGASTQNRGFKGFRGGLGQGTKDGQR
NALQSGTPGSREGGTLADGAGPKVTYVPPPPPDDEQAIFAHYQTGINFDKYDENIVEVSG
LDPPAALMSFADTNMCHTLTVNIAKGGYSKPTPVQKYSIPIILAGRDLMACAQTGSGKTA
AFLIPVVAQMMRDGVTASSFKEQQEPECIITAPTRELINQIFLEARKFVYGTCIRPVVIY
GGTQTDYSIRQVKQGCNILCATPGRLLDIIERGKIGLHNVKYLVLDEADRMLDMGFGADM
KKLVSFPDMPQKDKRQTLMFSATFPEEVQRLAGEFLKTDFLFVVVGRVGGACSDVQQNIL
QVPQYFKRDKLIEILHSIGNERTLVFVDTKKKADFIACFLCQENIPATSIHGDREQRERE
IALRDFRSGKCPVLVATSVAARGLDIESVQHVINFDLPSTIEEYVHRIGRTGRCGNTGKA
VGFFDNNSDGHLAQSLIKVLSDAQQEVPVWLTEVAFEAEGGRLPVNAQKNYRGRGKVNAG
EVKIGCSAREIESWD
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagaagactggaatgctgagataggggacgaggtgttagtcccatcccttgag
aaggttagcttgcttgagaaaccaaatgacccctcatctgtcttcagtcaaagtgtagac
tcatttggcactgatgaatttctggacacacagcatcagtcagtgagtagttttggtaga
ggaaggaattttgcagccaaaggttttcaagagggaaatgaagaagatgcctttacacaa
aacagagggtttaaaggatttggacaaggtgagagttttcaagaacgaagttctgtagat
ggtgctagtacacaaaacagagggtttaaaggatttcgtggtggccttggacaaggtgag
agttttcaagagggaaatgaagaagatgcctttacacaaaacagagggtttaaaggattt
ggacaaggtgagagtgtaggttttcaagaacgaagttctgtagatggtgctagtacacaa
aacagagggtttaaaggatttcgtggtggccttggacaaggtactaaagatgggcaaagg
aacgcactgcagtctggaactcctggttctagagaaggaggaacacttgcagatggtgca
ggtccaaaggtgacttacgtgcctcctcctccacctgatgatgaacaagccatctttgca
cattatcagacaggaattaattttgacaagtatgatgaaaacatcgttgaagtatcagga
ttagaccctccagcagcattaatgagttttgcagatactaacatgtgtcatactttaact
gtgaacattgctaaaggtggatactctaaacctactccagtgcagaagtacagcattcct
attatactggcaggacgggatttaatggcatgtgctcagacaggatcaggaaaaactgca
gcctttctcataccagttgtggcccaaatgatgagggatggtgtaactgccagtagcttt
aaagagcagcaagaaccagaatgtattattactgccccaaccagagaactgataaatcag
atcttcctagaagcaagaaaatttgtatatggaacttgtataaggcctgttgtgatctat
ggaggtacacaaacagactattcaattcgtcaggtaaagcaaggctgtaatatactgtgt
gccactccaggaaggcttctagacatcattgaaagaggaaagattggtttgcacaatgtg
aaatacttggtgcttgatgaagcggaccgcatgcttgacatgggttttggtgcagatatg
aagaagctggtatctttcccagacatgccacaaaaagacaaacgccaaacactaatgttt
agtgccacttttccggaagaagttcagaggctagctggtgaatttttgaaaactgatttt
ttgtttgttgttgttggacgtgtgggtggagcatgcagtgatgttcagcaaaatattctt
caagttcctcagtatttcaagagggataaactgatagaaattctacacagcataggtaat
gaacgaaccctggtctttgtggacacaaagaaaaaagcagacttcattgcgtgctttctt
tgtcaagaaaacataccagccactagtatccatggcgatagagaacagagagaaagagaa
atagctcttcgggattttcgttctggaaaatgtccagtccttgtggcaacctcagtggca
gcaagaggtctggacattgaaagcgttcagcatgttattaattttgatcttccttccacc
attgaagagtatgtacaccgaattgggcgaactggtcgttgtggaaatacagggaaagca
gttggcttctttgataacaattcagatggtcatcttgcacaatctctaattaaagtgctt
tcagacgctcagcaggaagttcctgtttggttgacagaagttgcttttgaggctgaagga
ggacgactcccagttaatgcccaaaagaattacagaggcagaggcaaagtgaatgcagga
gaagtaaagattgggtgttctgcaagagaaattgagtcatgggattga
DBGET
integrated database retrieval system
