Cinclus cinclus (white-throated dipper): 134056244
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Entry
134056244 CDS
T10813
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134056244 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134056244 (NIPBL)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
134056244 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
134056244
NCBI-ProteinID:
XP_062368884
LinkDB
All DBs
Position
Z:complement(73394223..73528055)
Genome browser
AA seq
2777 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTAHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNS
RHGSSEDYLQMVHRLSSDDGDPSIRGAASFSLRSPQSVCSPAGSDGALKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPPEAGGGTGGNRAASQETGSAGNGARPA
LMVSIDLQQAGRADSQATVTQDLDTIKKPEEIKQYNDGFVCIPQEDTVGVLKFKPENHPE
IFRKKSDFESQKTDIQQNENRQTEFQQNESRRLESKYNESKQLEVKHESRQMEMKQNESR
QTELKQNESRQMEMKQNEGKQNNGKQEIRQRPETPKQKSEGRPETPKQKNEGRPETPKHK
NDNKRDSSKPLSDKKIEISRHKLDVKSDPSRMKPESRPDPTKPRPDGRSVSDTPRRDHDS
LKQRSEDRGESERYRGDPSKIRRPEYLRSSNKNEHDSKHGVKSDGSKPEKFERKYRHESG
DSRFSSGDQKSRPDSPRIKQEGKGDSSKSRPDKPGFKSPNSKDERRTDGNKSKVDSNKAH
GDNKAEFPSYLLGGRSGALKHFVIPKIKRDKDGNVTQESRKTEFRGEHKDKVEKIGLVED
LNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSSKPNKGSIDQSVLKELPP
ELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDE
AWEYEEHDRRSSGDHRRSGHYHEGRRISGSGRYRNRSPDDSDMDDYSSPPSLSEVARKMK
KKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDDEIPQELLL
GKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEE
RLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYD
PVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQ
VSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNF
RLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEESNKKVDQDVLITNSYET
AMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLV
HQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSLARILKQVSGGDDEIQQLQK
ALLDYLDENTEIDASLVFSRKFYVAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETT
GQIMHRAESRKKFLRGIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIY
LTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVE
LLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMI
RRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQ
NLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFS
KIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDL
MKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKNQHQEDPNSTIL
TANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAI
IGLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADR
DWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHNQSSVRHFALNVIALTLNQGL
IHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINT
CPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIAD
NLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPSSDEETESDSN
SGSGSESEEEASKPRRLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLL
LMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKI
TEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAET
EDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARV
VQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNK
VVQTLRSLYAAKDGTSS
NT seq
8334 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaat
cttgtttcacaacttgtccacagtctcaatcaggtgtcgacagatcacatagagttgaaa
gataaccttggcagtgatgatccagaaggagatataccagtcttgctgcaggctattctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagc
gggatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tccaattatcaacaaaccactatctcacacagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttttggcgcaacagaacagtccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttatacagctcatcct
caaatgcagcaagcttctgtatccagtcctattgtcacagctgggatgaggaatctccat
gaaaataaagtttcaagtcagttgtctggaaattcagctaatcatcatgctgataattct
agacatggctcaagtgaagactacctacagatggtgcacagactcagcagtgatgatggc
gatccttcaataaggggtgctgcgtctttttccttgaggtcaccacagtcagtctgctct
ccagctggaagtgatggagcccttaaaggatcaagacaacctttaatccaacaatctcag
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttg
ccgcagcatgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctctgaagaagcgaaaacaagaaaacaaaccaccagaggctggaggtggtact
ggaggaaatagagcagcttctcaggagacaggctctgcaggaaatggggcaaggccagca
ttgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caggatttggacaccatcaaaaaacctgaagaaattaagcagtataatgatgggtttgtg
tgcattccccaagaagacactgttggagttcttaagtttaaacctgaaaaccatccagaa
atctttagaaaaaagtctgactttgaaagtcaaaagacagatattcagcaaaatgaaaac
agacaaacggaattccagcaaaatgagagcagacggttggaaagtaaatacaatgaaagc
aagcagttagaagtgaaacatgaaagcagacaaatggaaatgaaacaaaatgagagcaga
cagacagaactgaaacaaaacgagagcaggcaaatggagatgaaacaaaacgagggaaaa
cagaataatggcaaacaggaaatacggcagaggccagaaacaccgaaacagaagagtgaa
ggcagacctgaaacaccaaaacagaagaatgaagggaggcctgaaacaccaaaacacaaa
aatgataataagagggactccagtaagcctttgtcagacaagaaaattgaaatatctcgg
cacaaactagatgtgaagtctgatccttcaaggatgaaacctgaaagtcgacctgatcca
acaaaaccgaggcctgatgggcgctcagtttctgatacaccaaggcgtgaccatgatagc
cttaaacaaagatctgaggacagaggggagtcagagagatacaggggagatccatccaag
attagaaggcctgaatatttgagatcctcaaacaaaaatgaacatgattctaagcatggt
gttaaatctgatggttcaaaacctgagaaatttgaaaggaaatataggcatgagtctggt
gattcaaggttttcttctggggatcagaaatcaagacctgacagccctcgtattaaacag
gaaggtaaaggggattctagcaaatcaagacctgataaacctggttttaagtcaccaaac
agcaaggatgaacgaaggacagatggtaataagagtaaagtagatagtaataaagcacat
ggtgacaataaagcagagtttcccagttatttgttggggggaagatctggtgcattaaaa
cattttgtcattccaaaaatcaagcgtgataaagatggcaatgttactcaggagtcaagg
aaaactgaatttagaggtgaacataaggacaaagtagagaagattgggctagttgaagat
ctaaataaaggagctaagcctgtagttgtccttcaaaagctttctttggatgatgtacag
aaatttattaaggacagagaagataaatcaaggggctcttgttttaaacctaacaagaac
aagtcatccaaacctaataaaggtagcatagatcagtcagtgttaaaggagttgcctcct
gagctcctggcagaaattgaatccaccatgccactttgtgaacgtgtgaaaatgaacaag
cgcaaacgtagcacagttaatgagaaaccaaaatatgctgaaatcagttctgatgaagat
aatgacagtgaagaagcttttgaatcttctcgtaaaagacacaaaaaggatagagatgaa
gcttgggagtatgaagaacatgacagaagaagttctggtgaccataggagaagtggtcat
tatcatgaaggaaggaggatttctggtagtggccgttaccgtaatcgcagtcccgatgac
tctgatatggacgattattcttctcctcctagcctcagtgaggtggctagaaaaatgaag
aagaaagaaaaacaaaagaagaggaaagcttatgaacctaaactaacacctgaagaaatg
atggattcttcaaccttcaaaaggtttactgcttcaatagagaatattctggaaaatctg
gaagacatggattttacagcttttggtgatgatgatgagattccgcaggaattgctactg
ggcaaacatcagcttagtgagttgggtagtgaatctgcaaaaatcaaggcaatgggcatt
atggacaagctctcaacagataaaacagtaaaagtcctaaatattttggagaagaatatt
caagatggatcaaagctgtctactttacttaaccacaataatgacactgaagatgaggag
agattatggcgagatcttattatggaaagagtgacaaaatctgctgatgcttgtcttact
gctatcaatattatgacatcaccaaatatgcctaaagctgtatatattgaggacgtaata
gaaagagttattcagtacacaaaatttcatttgcagaacactctctatcctcagtatgat
cctgtgtatagagtggatcctcatggtggtggtgttttaagttcaaaagcaaagcgtgcc
aagtgttccacccacaagcaaagagttatagtgatgttgtataacaaagtttgtgacatt
gtcagcagtttgtcagaattgttagaaatacagcttctcacggatacgactattcttcag
gtgtcatcgatgggaataacacctttctttgtagaaaatgtcagcgagctacagttatgt
gccatcaaattagtgactgcagtgttctcccggtatgaaaaacacagacagctaatacta
gaagaaattttcacttcccttgcaagactaccaactagcaagaggagtttgagaaacttc
aggttaaacagcagtgacactgatggagagcctatgtacattcagatggtaacagcacta
gttctgcaacttattcagtgtgtggtgcacttaccatcagcagaaaaggattctaattca
gaggaggaatcaaacaagaaagtggatcaagatgtgcttattactaactcatatgaaaca
gccatgagaacagcacaaaacttcctttctattttccttaagaagtgtggcagtaaacaa
ggggaagaagactacaggccactatttgagaactttattcaagatctactttcaacagtc
aataaaccagaatggccagctgcagagttgctacttagcttactaggaaggctattggtt
caccagttcagtaacaaatctacagaaatggcattaagagttgcatcacttgactatctt
ggaactgtagcagcaagactgaggaaagatgcagtcaccagcaaaatggatcaaggttct
ttagccagaatcctcaaacaggtttcaggaggagatgatgaaattcaacagctgcaaaag
gctttactagattatctggatgagaacacagaaattgatgcatcattagtgttttctcgg
aagttttatgtagctcagtggtttcgtgatacaactatggagacagaaaaagcaattaaa
tctcagaaggatgaggattcatctgaaggaactcatcatgcaaaagatgttgagaccaca
ggacaaatcatgcatagagcagaaagtcgcaaaaagtttcttcgtggcatcattaaaact
gctccatctcagttcagtacattaaagatgaattctgatactgtggactatgaagatgca
tgtttgattgttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttat
ttgacacagattctgcgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatg
aagtgtttgtctgaggttgttgctgtagaccccagtattctagccaggctggatatgcag
cgaggagttcatgggcggctaatggataactccactagtgtacgagaagcagctgtggag
ctgcttgggcgatttgtgctctgtcgtccccagcttgctgagcagtattatgatatgctg
attgaaagaatattggatactggtatcagtgtcagaaaaagagtaataaagatacttaga
gatatctgcattgaacaaccaacatttcccaaaattacagaaatgtgtgtgaaaatgatt
cggagagtcaatgatgaagaaggcattaagaaattagtaaatgagacattccagaagctc
tggtttactccaactccacaccatgacaaagaagcaatgacaaggaaaatactaaacatc
actgatgtggttgcagcttgtagagatacaggatatgattggtttgaacagcttcttcag
aatctattgaagtcagaagaggatgcctcatataaaccggtgaagaaagcctgtactcaa
cttgttgacaatttggttgagcacattcttaagtatgaagaatctttatcagattctgac
aataaaggtgtgaattctggtcgcttggttgcttgcataaccactttgttcttattcagc
aaaataaggccccagctaatggtcaaacatgccatgaccatgcagccatacctgaccact
aaatgtagtacccagaatgatttcatggtgatctgcaatgttgcaaaaatcttagagctt
gtagtgccactaatggaacacccaagtgagacctttcttgcgactattgaggaagacctc
atgaaactcatcatcaaatatggcatgacagttgttcagcactgtgtgagctgtcttggg
gctgttgtgaacaaggtcacccagaactataaatttgtgtgggcctgttttaacagatac
tatggtgcactttctaaattaaaaaatcaacaccaagaagaccccaacagtacaatactc
actgccaataaaccagcactccttagatcacttttcactgttggagcactgtgtcggcat
tttgattttgatcaggaagattttaagggcaacagcaaggttaacattaaggataaagta
cttgaactgctgatgtattttacaaagcattcagatgaagaagtacagacaaaagccatt
attggtcttggatttgcatttattcagcacccaagtttaatgtttgaacaagaagtgaag
actctgtacaacagcattctttcagataagaactgttcagtaaacttaaaaatccaggtg
ttaaaaaacctccagacctacttgcaggaggaggatacacgtatgcagcaggcagacaga
gactggaaaaaagtagcaaaacaggaagacctgaaagaaatgggtgatatttcctcaggg
atgagtagttccatcatgcagctatatctcaaacaggtccttgaggctttctttcataac
cagtccagtgtacgccactttgctctaaatgtcattgcactgacattaaaccaaggtctc
atccatcctgttcagtgtgtgccatacttaattgctatgggcacagatccagagccctct
atgcgaaataaagctgaccaacagttggtggaaatagacaaaaaatacgctggattcatt
cacatgaaagcagtggctggtatgaagatgtcttatcaagtacaacaggcaattaatacc
tgcccaaaagatcctgtgagaggttttagacatgatgaatcatccagtgcactgtgttca
cacctctactccatgattcgagggaatcgtcaacacagacgagcctttctaatttcttta
ctcaacctctttgatgatactgcaaaaacagaggtgaatatgcttttgtacatagcagac
aatctagcctgttttccttaccaaacacaggaagagccactgtttataatgcatcatata
gacattacactatcagtttctggtagcaacctactacagtcatttaaagagtctatggtg
aaagacaaaaaaaaggaaaggaagccttcatcggatgaggagactgagagtgacagtaac
agtggtagcgggagtgaaagtgaggaggaagcttctaagcctcggaggttacggaaacga
gtggactctgactcagattctgatgaagaaaatgatataaatgcagtgatgaagtgttta
cctgaaaattcagctcctttaattgaatttgctaatgtctcccaaggcatattattactt
ctgatgttgaaacagcatctaaagaacctctgtggattctctgatagtaaaattcaaaaa
tattctccatctgaatctgcaaaagtttatgataaagctataaacaggaagacgggagtg
catttccatcctaaacaaactctggattttctgcggagtgatatggctaattccaagatc
acagaagaggtgaagaggagtatagtaaaacagtacttagatttcaagctccttatggaa
catttggatcctgatgaagaggaagaagatggagaggtgtcagctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagaca
gaggacgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattgagaagg
tcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgatgtc
atggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacaaattgcaagagta
gtacagaaaaccagcaatggcttcagtgttcagtggatggcaggctcctacagtggctcc
tggactgaggctaagcgccgtgatggccgcaaactggtgccttgggtagacactattaaa
gagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaataaa
gttgtgcagactttacgatcgctgtatgccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system
