Cinclus cinclus (white-throated dipper): 134056326
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Entry
134056326 CDS
T10813
Symbol
TRIM45
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM45
KO
K12021
tripartite motif-containing protein 45
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134056326 (TRIM45)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134056326 (TRIM45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
Invasin_D3
Laminin_II
DUF4455
DUF7337
Motif
Other DBs
NCBI-GeneID:
134056326
NCBI-ProteinID:
XP_062369052
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Position
2:complement(28621882..28629373)
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AA seq
523 aa
AA seq
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MSAPRCPRCAQPCVSPRLLPCLHSLCEPCLRRLGPPGAARPVLCPVCDAEVSLPAGGAGQ
LPPDCLAGSRAGAAAGCDLCADGAAAGRCLTCGVRLCRFCCRAHRRQKKTASHAVTELES
TKDCSQAGKPLLCPSHPTEELQLFCEQCDQPVCRECVLGRHRQHPFDLTSTVIHKHGDAL
RELLKSSQQHMDTLEDVLSQVDEMGGAVRSRAEAVATEICLFARGYVKAIEKHRDQLLKQ
LEDLKVQKENLLHLQKAQLQQLLLDMRTGVEFTEHLLMSGSDVEILVTKGLVSSRLTKLN
STAYSTHPSVDDRIQFFPHERAGQCCGYEVFGAILNKVVDPARCTLHGEDLHSARQNQLS
DFTLLCKDTTGECMGQGGEAVRVTITHKAKRDCAVKPTVCDNGDGTYCISYCPEEPGLYA
VCVCVKGQHVQGSPFTLMVKHKFREHQGVFHCCTFCSSGGQKAARCACGGTMPGGYQGCG
HGHKGHPGCHHWSCCGQVKESSECLCGPPSDTSQRSLLRTVAL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaccgcgctgcccgcgctgcgcccagccctgcgtgtcgccgcggctgctgccc
tgcctgcactcgctgtgcgagccctgcctgcggcggctcggaccgccgggcgccgcccgc
cccgtcctgtgcccggtgtgcgacgccgaggtgtcgctgccggccggcggcgcggggcag
ctcccacccgactgcctggccgggagccgcgccggggccgcggccgggtgcgacctctgc
gccgacggggcggcggccgggcggtgcctgacctgcggcgtccgcctctgccgcttctgc
tgccgggcgcacaggagacagaagaaaacggcctcccatgctgtgacagagctggagagc
accaaggattgcagccaggctgggaagcctctcctgtgcccctcccatcccacagaggag
cttcagctgttctgtgagcagtgtgaccagcccgtgtgccgggagtgcgttctgggcaga
caccgtcagcatccctttgacctcaccagcactgtcatccacaagcacggagatgccctg
cgggagctgctgaagagcagccagcagcacatggacaccctggaggatgtgctgagccag
gttgatgagatgggcggtgccgtccgcagtcgcgcagaggctgtggccacagagatctgc
ctgtttgccaggggctacgtgaaagcaattgaaaagcaccgagaccagctgctgaagcag
ctggaggacttgaaggtgcagaaggaaaacctgctgcacttgcagaaggcccagctgcag
cagctgctgctggacatgaggacaggcgtggagttcacagagcacttgctgatgagcggc
tcagatgtggagatcctggtcaccaaagggctggtgtccagccgtctgacaaagctcaac
agcactgcttacagcacccaccccagtgtggatgacaggatccagttctttcctcacgag
agggcggggcagtgttgcggctatgaagtttttggggccattctcaataaagtggttgat
ccagccagatgtaccctgcatggggaagatctccacagtgcccgtcagaaccagctgagt
gactttaccctactgtgcaaggacactacaggggagtgcatggggcagggaggagaggct
gtgcgggtcaccatcacccacaaggccaagagggactgtgcagtcaagccaacagtgtgt
gataatggtgatgggacctactgtatttcctactgccctgaggagccaggcttgtatgct
gtctgcgtctgtgtgaaagggcaacatgtacagggctctccctttactctgatggtgaag
cacaagttccgtgagcaccagggggtgttccactgctgcacattctgctccagtggaggc
cagaaagccgctcgctgtgcctgtggtgggaccatgccaggtgggtaccaaggctgtggc
cacgggcacaaaggtcaccctggctgccatcactggtcgtgctgtggacaagtgaaggag
agctcagagtgtttgtgtgggccacccagtgacacttcacagaggagtctgctcaggaca
gtggcactctga
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