Cinclus cinclus (white-throated dipper): 134056679
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Entry
134056679 CDS
T10813
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134056679 (RNF20)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134056679 (RNF20)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
134056679 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
BRE1
zf-RING_UBOX
zf-rbx1
CoV_S2
Motif
Other DBs
NCBI-GeneID:
134056679
NCBI-ProteinID:
XP_062369522
LinkDB
All DBs
Position
Z:complement(21322370..21341058)
Genome browser
AA seq
1014 aa
AA seq
DB search
MSGIGNKRMAGEPGPSAPPEKKAGVEDLGTTVETIKLGGVSSTEELDIRTLQTKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIINRYWNQFDENIRIILKRFDLDQGLGDL
LSERKALVVPEPEPDSDSNQERKDERERGEGLEPAFSFLATLASSTSEEIESQLQERVES
SRRAVAQIVTMYDKLQEKLDVLSHKLNSGDISLMEEAVVELNSYLSHENGQLQELADVLQ
EKHRVMSQEFSKLQERVETAESRVSVLETMIDDLQWDIDKIRKREQRLNRHLADVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAGNRLNELEELRQDLEEVTAQN
EKLKVELRRAVEEAVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRATHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAVSLFSISMEVL
KKVDGSLVCYRGVAVFAGPINREMRHLISSLQNHNHQLKGEVLRYKRKLREAQSDLSKIR
SRSGSALLQSQSSTEDTKEEPTEVKQEPDDPSAQVSVPKAASEDINEMKARRDEEERERE
RREREREREKEKEKEKEREREKEKEKEKEREREKQKQKESEKERESKEKEKGKHEDGRKK
EAEVIKQLKAELKKAQESQKEMKLLLDMYRSAPKEQRDKVQLMAAEKKAKAELEELRQRV
KELEDKEKKESKKMADEDALRKIRAVEEQIEYLQKKLAMAKQEEEALLSEMDVTGQAFED
MQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQVLTLKTQVDAQLQV
VRKLEEKEHLLQSSIGTGEKELGLRTQALEMNKRKAMDAAQLADDLKAQLELAQKKLHDF
QEEIVENRVTREKEMFNFKRAEEDISRLRRKLETTKKPDMVPNCDEILMEEIKDYKARLT
CPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaattggcaataaacggatggctggagagcctggcccttctgcacctccagag
aagaaggcaggggttgaagatttgggcaccactgtggagaccattaaacttggtggtgtt
tcttcaacggaggagctggacatccggaccctgcagaccaaaaacaggaagctcgcagag
atgcttgaccagcgccaggccatagaagatgagctgcgggagcacattgagaagctggag
cgtcggcaggccaccgacgatgcctctctgctgatcatcaaccgatactggaatcagttt
gatgaaaatatccgtatcatccttaaacgcttcgacctggaccaagggcttggagacctt
ttgtctgaaagaaaagcactggtggtgccagaacctgaaccagactcagacagtaatcag
gagcgcaaagatgagagggaacgaggggaaggactggagccagcattctccttcctggcc
actctagccagcagcaccagtgaggagatagagtctcagctacaggagcgtgtggagtcc
tcccgccgggctgttgcccagattgtgacaatgtatgacaagctgcaggagaagctggat
gtgctgtctcacaagctgaatagtggagatatttcactgatggaagaagcagtagtggaa
ctgaattcctacctgtcgcacgagaatggacagctgcaggaactggctgacgttcttcag
gagaagcacagagtcatgtctcaggagttctccaagctgcaagagagggtggagacagca
gaatcccgggtgtctgtcctggagaccatgattgatgaccttcagtgggacattgacaag
atccgcaagagggagcagagactcaaccgccacctggctgatgtcctggagcgagtaaat
tccaaaggctacaaggtgtatggagctggtagcagcctctatggaggaacaatcaccatt
aatgcccgtaagtttgaggagatgaatgcagagttggaagagaataaagagcttgctggg
aatcgccttaatgaattggaagaactacgtcaggatcttgaggaagtaacagcacagaat
gaaaagctcaaggttgagctgcgacgagcagtggaagaggctgtgaaggagaccccggaa
tatcgctgcatgcagtcacagttttctgttttgtataatgagagtctccagctgaaggca
catcttgacgaggcccgcacactgcttcatggtacccgtgccacacaccagcgtcaggtg
gaactgatcgagagagatgaggtcagccttcacaagaagctgcgcactgaggtgattcag
ctggaggacaccctggcacaagtccgcaaagaatatgagatgttgaggatagagtttgaa
cagacgcttgctgccaatgagcaagcagttagcttgttctccatttccatggaagtcctc
aagaaggttgatggaagtttggtttgttacagaggtgttgctgtttttgcaggcccaata
aatcgggagatgcgtcacctcatcagcagcctccagaatcacaaccaccagctgaaggga
gaggtgttgagatacaagcgcaaactgagagaggcccagtctgacctgagcaagatccgc
tctcgcagtggcagtgctctcctccagtcccagtccagcactgaagacacaaaggaggaa
cctacagaggtcaagcaggagcctgatgatccttctgcccaagtgtctgttcccaaggct
gcttctgaagatattaatgaaatgaaagccaggagagatgaagaggaacgggagcgggag
agacgggaaagggagagggaacgagagaaggaaaaggagaaggagaaagaaagagaacga
gaaaaagagaaggagaaggaaaaggaacgagaacgggaaaagcagaagcagaaggaatct
gagaaggagagagaatccaaagagaaggagaaagggaagcatgaagatggaagaaagaag
gaggctgaagtgatcaagcagctgaaggctgagctcaagaaggcccaggaaagccagaag
gagatgaaactgttgctagatatgtaccgttctgcccctaaagagcagagagacaaagtg
cagctgatggcagctgagaagaaggcaaaagctgagcttgaagaactgaggcagagggtg
aaagaattggaagacaaggaaaaaaaggagagtaaaaagatggctgatgaggatgccctc
cgcaagatccgagcagtggaggaacagattgaatatttacagaagaaacttgccatggct
aagcaggaggaagaggccctgctttcagaaatggatgtcacaggccaagcctttgaagac
atgcaagagcagaacatccgcctgatgcagcagctgcgggagaaggatgatgccaacttc
aagctgatgtcagaacgtatcaagtccaaccagatccataaactgctaaaagaggaaaag
gaggagctggcagaccaagttttgacactgaaaacacaggtggatgcccagctgcaggtt
gtacgtaagctggaggagaaggaacacctactgcagagcagtattggaacaggagagaag
gagttgggtctgcgaacacaggccctggaaatgaacaaacgcaaggccatggatgcagcc
cagcttgcagatgatctgaaggcccagctagaactggctcagaagaaattacatgatttt
caggaggagattgtggaaaacagagtaactagagagaaagagatgttcaacttcaaaagg
gctgaggaagatatttctaggttacgcaggaagctggagaccacaaagaagcctgacatg
gttcccaactgtgatgagatcctgatggaggaaatcaaggattacaaggcccgtctgact
tgcccatgctgcaacatgcgcaagaaggatgcggtgctcaccaagtgcttccacgtcttc
tgcttcgagtgcgtgaagacacgctacgacacccggcagcgcaagtgccccaagtgcaat
gcagccttcggggccaatgacttccacaggatctacatcggctga
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